Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0991 |
Symbol | |
ID | 4439962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 987213 |
End bp | 988502 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672836 |
Product | recombination factor protein RarA |
Protein accession | YP_814807 |
Protein GI | 116629635 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000017106 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 103 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATTCTA TGCCAATAAA AAAGCCATTA GCAGACTTAA TCAGGCCTAA AGATTTATCA CAGTTTGTAG GTCAAAAAGA TTTAATTGAA GAGGGACGTC CCCTTTATCA AATTATTAAA AAACATGTAC CAATTTCACT GCTTCTCTGG GGACCACCAG GAACAGGAAA AACTAGTTTA GCTCAAATTA TTGCTCGTGA ATTTGACTAT CCATTGGCAA CTTTTAACGC TTCAATTGAT AATAAGGCTA AGCTTACCCA GATCATTAAT ACATATCCTT ATCAATCCTT TGTTTTATTA ATTGATGAGA TTCACCGGAT GACCACTACG CTGCAAGATT TTCTGCTGCC TTATTTAGAA AATGGACGTA TTCTTTTAAT TGGGGCAACT ACGGAAAATC CTATTATGTC GATTGTGCCA GCAGTGCGAT CACGGTGTCA GATTTTTGAA TTCAAAGCGT TAAGTGATGA AGATATTGAA CAAGTTTTAA TCCGTGCTTT AAAAGAAGTC TTTCATTTTA AAGATGAAAA TATTGACCGA AAAGCGGTTA AGATTATTGC CATTTCCGCC GATGGAGATT TACGAGTAGC ATTAAATCTT TTAGAAACGA TTCATGCAGT TAATGAGGAT CTTTCAGTTG AAGAAGTAAA GCAATTTGTA AAGGGACAAC ATTTTGCTTA TGATCGAAAA GCAACTAAGC ACTATGATTA CTTAGCTGCT TATTCCGATT CAATAGCCGG TTCTGACACA GACGCCGCTT TATATTATTT AGCAGTTTTA CTTAAAAATG GAGATCTTGC TTCAGTAGTA AGGCGTCTGC GTGAGATTCC ATATACTTAC ATTGGCTTAG CTAATCCTGA GCAAGCTACG CAGATTGTGA TTGCAGCTAA TCAAGCAGAA AAAATTGGCA TGCCTAAGGC AAAATATCCC TTGATGTTTG CAACAATGCT GATGTGTTTA TCGCCAAAAT CAGGTGTTTT TGATGAAATC TGGCAAAAAT TAGACGAAGA TACTGATCAT CCAAGTAAGC ATCCCATGCC ACGAGGACTT CGTGATATGC ACTATAAACA TTCTGAAGAA ATAACTGGTG GCGGACTAAT TGATAATCCA TTTGCGCAGC CCTTTCAGAT CGCAAAGCAA AATTACATGC CTAAAGGGCT TGAAGGAAAA AGATATTATT TTGCCAAAGA TAACGCAAGT GAGAAAAAGT TTGAACAGCA GTATTTGAAG CTGCATCGAT ATATTTATGG TAAGGATTAT GATAAAGAAG GTAATAACTA TGAAAATTGA
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Protein sequence | MNSMPIKKPL ADLIRPKDLS QFVGQKDLIE EGRPLYQIIK KHVPISLLLW GPPGTGKTSL AQIIAREFDY PLATFNASID NKAKLTQIIN TYPYQSFVLL IDEIHRMTTT LQDFLLPYLE NGRILLIGAT TENPIMSIVP AVRSRCQIFE FKALSDEDIE QVLIRALKEV FHFKDENIDR KAVKIIAISA DGDLRVALNL LETIHAVNED LSVEEVKQFV KGQHFAYDRK ATKHYDYLAA YSDSIAGSDT DAALYYLAVL LKNGDLASVV RRLREIPYTY IGLANPEQAT QIVIAANQAE KIGMPKAKYP LMFATMLMCL SPKSGVFDEI WQKLDEDTDH PSKHPMPRGL RDMHYKHSEE ITGGGLIDNP FAQPFQIAKQ NYMPKGLEGK RYYFAKDNAS EKKFEQQYLK LHRYIYGKDY DKEGNNYEN
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