Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0870 |
Symbol | |
ID | 4439912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 859663 |
End bp | 860589 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672726 |
Product | inosine-uridine nucleoside N-ribohydrolase |
Protein accession | YP_814697 |
Protein GI | 116629525 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAATA TTTATTTTAA TCATGATGGA AACATCGATG ATTTGGTCTC ACTTCTTTTA CTATTGCAAG CACCTGATAT CAAACTAATT GGAATCAGCG CAATTGATGG TGATGGATAT ATCGATCCAG CAGTAGAAGC TTGTCGAAAA ATGGTCGATA AATTTAACTT ACGCGGTGAT AAGTTAGAAG TAGCTCGCTC AAATTCACGT GCAATTCATC AATTTCCAAA AGAGTGGCGC ATGGCAACTT ATTCCTTTAA TTACTTCCCT ATTTTGAATG AAAGCGGAGA AATTAAAACA CCTGAAGCTC CACTTCCTGC CCATTTAGAT ATGATTGATA AAATTAAAAA GGCAGATGGT CCAGTTACTC TAATCATGAC CGGACCAATT ACTGACCTGG CAAGAGCTTT AGATGAAGAT GCTTCTATTC AGTCAAAAAT CGAAAAAGTT TACTGGATGG GTGGTTCATT AGATGGGCAC GGCAATGTAG TGAGTGTTGA TGCAGACGAA ACGCAAGAAT GGAATGCTTT CTGGGATCCA GAGGCTGTAA GACGTGTTCT AGATTCAGAC CTCGACATTC AAATGGTAGG TCTTGAAAGT ACTGAAGAAT TGCCATTAAC CGATGAACTT CGACAGCACT GGGCTAGTTT AAGAAAATAT CCAGCTATTG ATTTAGTTGG CTTAGGATAC AGTCTAATTA TCTCTGTACC TAATGCAGAA CTATACTTGT GGGACGTTTT AACAACTATG TCTGCATTAT ATCCTGAACT CGTTGAAACT CGTCAGATTA AAGCCAATGT AATTACTTCA GGCTTAGCAA GCGGACGAAT GTTCATTGAT CCTAATGGAA AAGAAATTAC TGAAGTGACA AAAGCAGATA AAGATTCATT CTTTGAAAAA ATAGACAAAA TTTTAGAAAG ACAATAA
|
Protein sequence | MKNIYFNHDG NIDDLVSLLL LLQAPDIKLI GISAIDGDGY IDPAVEACRK MVDKFNLRGD KLEVARSNSR AIHQFPKEWR MATYSFNYFP ILNESGEIKT PEAPLPAHLD MIDKIKKADG PVTLIMTGPI TDLARALDED ASIQSKIEKV YWMGGSLDGH GNVVSVDADE TQEWNAFWDP EAVRRVLDSD LDIQMVGLES TEELPLTDEL RQHWASLRKY PAIDLVGLGY SLIISVPNAE LYLWDVLTTM SALYPELVET RQIKANVITS GLASGRMFID PNGKEITEVT KADKDSFFEK IDKILERQ
|
| |