Gene LGAS_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0870 
Symbol 
ID4439912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp859663 
End bp860589 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content37% 
IMG OID639672726 
Productinosine-uridine nucleoside N-ribohydrolase 
Protein accessionYP_814697 
Protein GI116629525 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TTTATTTTAA TCATGATGGA AACATCGATG ATTTGGTCTC ACTTCTTTTA 
CTATTGCAAG CACCTGATAT CAAACTAATT GGAATCAGCG CAATTGATGG TGATGGATAT
ATCGATCCAG CAGTAGAAGC TTGTCGAAAA ATGGTCGATA AATTTAACTT ACGCGGTGAT
AAGTTAGAAG TAGCTCGCTC AAATTCACGT GCAATTCATC AATTTCCAAA AGAGTGGCGC
ATGGCAACTT ATTCCTTTAA TTACTTCCCT ATTTTGAATG AAAGCGGAGA AATTAAAACA
CCTGAAGCTC CACTTCCTGC CCATTTAGAT ATGATTGATA AAATTAAAAA GGCAGATGGT
CCAGTTACTC TAATCATGAC CGGACCAATT ACTGACCTGG CAAGAGCTTT AGATGAAGAT
GCTTCTATTC AGTCAAAAAT CGAAAAAGTT TACTGGATGG GTGGTTCATT AGATGGGCAC
GGCAATGTAG TGAGTGTTGA TGCAGACGAA ACGCAAGAAT GGAATGCTTT CTGGGATCCA
GAGGCTGTAA GACGTGTTCT AGATTCAGAC CTCGACATTC AAATGGTAGG TCTTGAAAGT
ACTGAAGAAT TGCCATTAAC CGATGAACTT CGACAGCACT GGGCTAGTTT AAGAAAATAT
CCAGCTATTG ATTTAGTTGG CTTAGGATAC AGTCTAATTA TCTCTGTACC TAATGCAGAA
CTATACTTGT GGGACGTTTT AACAACTATG TCTGCATTAT ATCCTGAACT CGTTGAAACT
CGTCAGATTA AAGCCAATGT AATTACTTCA GGCTTAGCAA GCGGACGAAT GTTCATTGAT
CCTAATGGAA AAGAAATTAC TGAAGTGACA AAAGCAGATA AAGATTCATT CTTTGAAAAA
ATAGACAAAA TTTTAGAAAG ACAATAA
 
Protein sequence
MKNIYFNHDG NIDDLVSLLL LLQAPDIKLI GISAIDGDGY IDPAVEACRK MVDKFNLRGD 
KLEVARSNSR AIHQFPKEWR MATYSFNYFP ILNESGEIKT PEAPLPAHLD MIDKIKKADG
PVTLIMTGPI TDLARALDED ASIQSKIEKV YWMGGSLDGH GNVVSVDADE TQEWNAFWDP
EAVRRVLDSD LDIQMVGLES TEELPLTDEL RQHWASLRKY PAIDLVGLGY SLIISVPNAE
LYLWDVLTTM SALYPELVET RQIKANVITS GLASGRMFID PNGKEITEVT KADKDSFFEK
IDKILERQ