Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0464 |
Symbol | |
ID | 4440360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 493853 |
End bp | 494539 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639672322 |
Product | hypothetical protein |
Protein accession | YP_814300 |
Protein GI | 116629128 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.767953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAAAA TGAAAAAGAT AAATAGATAT CAAAATTCTG TTTTAATTAT TGGAACAATA CTAGCTATTT TAGTATTAGC AATTATTTTA TTTCCTCATC GTAATGTATC GCTTGCAACT CCAAATAAAA TAGTAAACAG TAAAGTAACC AAAAAAGTGG CTCCAAAAGT TAAAAAAGTT ACACAAAAGA ATTCCAACCT ACCATATTCT GATCCTGAAG ATTTACAACC AGCTGGCAGC TGGAAGGTTA AAAGCGAAAG TAAGGCACAT CCTGATTTAT TAAGTTTAAG TAATTTGTGG ATAAGAGTGT CAATTAAGGG CAATCGTGTT TATATTATGG ATGGCAACAA GCCAGTCTAT ACAATGCTTG CCTCTTGTGG TGTATATCAT AATGGAAAAT CTGCAACACC AACTGGAACT TATGCTGTCG AAGCTGAAAG AGGAGCAACC TTTTTTAACC AGAGTCTCCA GGTTGGCGCA CGTACTTATA TTAGCTGGCA CGGCCATGGA ACTTATCTTT TTCATTCAGT CCCAACAGAT GGTAATAATA AAATCATGAA GAATGAAGCA AAGAAACTTG GTAAAACTCA AGCCTCTCAT GGTTGCATTC GCTTGAGCAT TCCTGATTCT AAATGGCTAT ATGAAAAATT GCCTGTAGGC ACAAAAGTTG TAGTAAAAGA TAAGTAA
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Protein sequence | MNKMKKINRY QNSVLIIGTI LAILVLAIIL FPHRNVSLAT PNKIVNSKVT KKVAPKVKKV TQKNSNLPYS DPEDLQPAGS WKVKSESKAH PDLLSLSNLW IRVSIKGNRV YIMDGNKPVY TMLASCGVYH NGKSATPTGT YAVEAERGAT FFNQSLQVGA RTYISWHGHG TYLFHSVPTD GNNKIMKNEA KKLGKTQASH GCIRLSIPDS KWLYEKLPVG TKVVVKDK
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