| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0352 |
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| Symbol | |
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| ID | 4440283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 377416 |
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| End bp | 378432 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672210 |
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| Product | geranylgeranyl pyrophosphate synthase |
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| Protein accession | YP_814195 |
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| Protein GI | 116629023 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.00291218 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAGAAA AAAGAAATAA TATCAAAAAC AAATTCACTT TTTGGGATAG TTTCCCTCAA
GTACAAAAAG ATATGATCGA AATTAGTCAT ATTATTCTAA CACACGTCAA TAGCGTTCCC
GGTTTATTAG GGCAAGCACT AGAAGATACC TTCGCTGTTC CTGGAAAAAT GCTTCGTCCT
GCTTGTGTAA TGCTCTTTGG CGCATTTGGT CCTGACGCCG ATCAAAAACA TGACGAGCTT
CAGAAAATAG CAACTTCTAT TGAAACACTT CATAATGCAA CTTTAATTCA TGACGACATT
ATTGATGAAT CTAGCATGCG GCATGGTCGC CCATCTATTC AAACTAAGTA TGGCAAGCAC
ATCGCCGTTT ATGCAGGTGA CTATTTAGTT GCCCTTTCGC TAACGCTTTT AAGTGAAAAT
GCTCAAAGCT TACATAGCGT AATTGCTGAC GGAAAAACAA TGCAAAATAT TTTAGTCGGC
GAAACCGAGC AATATAATAA TGCCTATAAT ATCGACATTT CTGAAAAAGA ATATTTAGAC
CAAATTAAGG GCAAAACTGG CGTTTTATTT GGTTTAGCTT GTTTTATTGG TGCTTATGAA
AGTGGAACTA AAGTAACTAA AGCATTAAAA ACTAAAAAGT TTGGGGAATA CCTAGGACAA
GCTTTTCAAC TAAGAGACGA TATTTTGGAC TATACAACTA CAAGCTCTAC TTTTAAAAAA
CCGGTCTTAC TTGACGTTAA AGATGGTATT TATTCAGGGC CTTTAATTTT TGCTCTGCAA
AACGATGACA ATAATCATTT ACACGAATTA GTAAAAATGG GAAAAGATCT GACCCAAGAT
CAATTACATG AAATTGAAAA TTTGGTCAAT CATCTTGGCG GCGTGGAACG AGCACAAAAG
TTAGCTGATC AATATACTGA AAAAGCCCTG GCTAGTTTAA AAAAACATTG GCCAGATAAT
GAGAATCGGG CTTTGATCGA ACAATTAACA GGTAGATTAT TAAAAAGACA ATATTAA
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| Protein sequence | MLEKRNNIKN KFTFWDSFPQ VQKDMIEISH IILTHVNSVP GLLGQALEDT FAVPGKMLRP
ACVMLFGAFG PDADQKHDEL QKIATSIETL HNATLIHDDI IDESSMRHGR PSIQTKYGKH
IAVYAGDYLV ALSLTLLSEN AQSLHSVIAD GKTMQNILVG ETEQYNNAYN IDISEKEYLD
QIKGKTGVLF GLACFIGAYE SGTKVTKALK TKKFGEYLGQ AFQLRDDILD YTTTSSTFKK
PVLLDVKDGI YSGPLIFALQ NDDNNHLHEL VKMGKDLTQD QLHEIENLVN HLGGVERAQK
LADQYTEKAL ASLKKHWPDN ENRALIEQLT GRLLKRQY
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