| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0014 |
|---|
| Symbol | |
|---|
| ID | 4438899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 15201 |
|---|
| End bp | 16085 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639671876 |
|---|
| Product | transcriptional regulator and fructokinase |
|---|
| Protein accession | YP_813869 |
|---|
| Protein GI | 116628697 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 88 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.000579085 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGAAG GTAAATATGT AGGTAGTATT GAAGCCGGTG GTACTAAATT TATCTTGGCA
GTTCAAGATA CAGAAAGCGG CGAAGTTGTA GCAAAGAAGA GAATCCCAAC AACTGATGCA
AAAGAAACTT TAGCAAAAAG TGTTGAGTTT TTTAAAGAAC ATCCAGTATC TGCTTTAGGA
ATCGGAACTT TTGGTCCAAT TGATATCAAT TCAAATTCAA GAACATTTGG TTACATCTTA
GATACGCCTA AGCGTGGCTG GTCTGGAACA AATGTTAAAG GCACTTTTGA AAAAGAATTG
GGTATTCCAG TTGTAATGAC TACCGATGTT AATGCATCTT GCTACGGTGA ATATATTGCG
CGTGGCAGAG ATAATTCTAA GACTTACTTT TATGTAACAA TCGGAACAGG AATTGGTGCT
GGTGCAGTTC AAGCCGGGAA GTTTATTGGT CTAAATAATC ATCCAGAAAT GGGACATATG
TTAGTAACTC CTTATCCAGG CGATAACTAT ACTGGAAAAT GTCCATTCCA TGGTAATAAA
TGTGTTGAAG GGATGGCAGC GGGTCCTTCA CTCGAGGGAA GGACCGGCAT TCCGGGTGAG
AAATTACCTA GAGACCATAA AGTATTTACT TATGTGTCTT ACTATGTAGC ACAATTATTG
TTTAATGCTT ATATGACTAT GCGTCCTGAT GTAATGGTTG TTGGTGGATC AGTTTTAAAT
GATCAGGATC TGGTACAAGT TCGCGGATTC TTTAAAGAGT TCAACAATAA CTATGTAGCA
ACTCCAGATG TTGATGAATT AATTGTTCGT CCAGCCGTTG CAGATAATGG CTCTGCAACT
TTAGGTGATT TTGAATTAGC TAAAGAAGCT TTAAAGAATA AGTAA
|
|---|
| Protein sequence | MVEGKYVGSI EAGGTKFILA VQDTESGEVV AKKRIPTTDA KETLAKSVEF FKEHPVSALG
IGTFGPIDIN SNSRTFGYIL DTPKRGWSGT NVKGTFEKEL GIPVVMTTDV NASCYGEYIA
RGRDNSKTYF YVTIGTGIGA GAVQAGKFIG LNNHPEMGHM LVTPYPGDNY TGKCPFHGNK
CVEGMAAGPS LEGRTGIPGE KLPRDHKVFT YVSYYVAQLL FNAYMTMRPD VMVVGGSVLN
DQDLVQVRGF FKEFNNNYVA TPDVDELIVR PAVADNGSAT LGDFELAKEA LKNK
|
|---|
| |