Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1946 |
Symbol | |
ID | 4432152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1838822 |
End bp | 1839751 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639667645 |
Product | ABC-type uncharacterized transport system, ATPase component |
Protein accession | YP_811542 |
Protein GI | 116512635 |
COG category | [R] General function prediction only |
COG ID | [COG4152] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.036978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTAA AGATTGACAA AGTTCGCAAA AGCTTTGGAG ACAAAATTGC TGTTGACAAT CTCAATATGG TGGTTAAACC AGGCGAAGTT ATGGGCTTAA TTGGTCAAAA TGGTGCAGGT AAAACAACAA CTTTTCGGAT GATTCTCAAT TTTATTTCAG CTGACCAAGG AAGAATTACT TGGAAAGATG GCCCGATAAA TCAAGAAATT AAACAAAAAA TTGGTTTTTT ACCCGAAGAG CGAGGTCTCT ATCAAAAAAT GACGGTAGAG GATCAAATCC TTTATTTTGC CGAACTACAT GGGATGAAAC GGGCAGATGC ACGTCTAAAA CTTCAAGATT GGATGAAACG CTTAGAAGTT GTTGGAAAAC CAATGGATAA AGTTCAGACG CTCTCAAAAG GGAATGCCCA AAAAATTCAA TTTATCGCAA CCTTGATTCA TGAACCTGAA TTTTTGATTT TAGACGAACC ATTCACAGGA CTTGATCCTG TAAATACAGA ACTTTTGCGA AATGAAATTA AGCGAAGTCG TGATAAGGGA GCAGCAGTTA TTTTCTCTAA TCATAATATG AGTGATGTTG AGCTCTTATC TGACCACTTG CTGATGCTAA AAGGTGGGCA AACGATGAAT GGTACAGTTG AAGATATCAG AGCTTCTTAT GGTCGGACCC GTGTTTATTT GGAGTCGGAC CTATCAAATG ATGAACTCTC CTTGATTTCA GGAGTTGAGT CAATTGAAAA AAGAGGGAGT GGCCGTTCGA TTAAAATTTC TGAAGCAAAT GTTGGTCGTG AAATTTTTCA AAAAGTAGCC AAAGATGGCT ATGTTCAAGC CTTTGTTCAA TCCCCTCCCT CCCTTGATGA AATTTTCCGA ATGGAAGTGG CTGAGCATGA TCAAGAAGAC CTAAGCGCGA AAAGTGGGGT GGCGAAATGA
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Protein sequence | MTLKIDKVRK SFGDKIAVDN LNMVVKPGEV MGLIGQNGAG KTTTFRMILN FISADQGRIT WKDGPINQEI KQKIGFLPEE RGLYQKMTVE DQILYFAELH GMKRADARLK LQDWMKRLEV VGKPMDKVQT LSKGNAQKIQ FIATLIHEPE FLILDEPFTG LDPVNTELLR NEIKRSRDKG AAVIFSNHNM SDVELLSDHL LMLKGGQTMN GTVEDIRASY GRTRVYLESD LSNDELSLIS GVESIEKRGS GRSIKISEAN VGREIFQKVA KDGYVQAFVQ SPPSLDEIFR MEVAEHDQED LSAKSGVAK
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