Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1548 |
Symbol | trpA |
ID | 4433540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1466345 |
End bp | 1467106 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639667266 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_809476 |
Protein GI | 116512260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTT TACAAGCAAA ATTGAGCAAT AAAAAAAATA ATTTTGTTCC CTATATTATG GCAGGTGACC ATGAAAGAGG ATTAGAAGGG CTCAATGAAA CCATTCAACT TCTTGAACAA GCCGGGAGTT CTGCCATTGA AATTGGTGTA CCCTTCTCAG ACCCCGTTGC TGACGGACCA GTAATTGAAC AAGCTGGCTT ACGAGCCTTA GCCAAAAATG TTTCACTATC AAAGATTCTT GACAGCTTAA AATCAATTGA AACAGAAGTT CCTCTTGTCA TTATGACTTA TTTTAATCCT GTCTATCAGT TTGGAATTGA AAATTTTGTT GCAGCTCTTG AGAATACAGC AGTAAAAGGT CTAATTATTC CTGATTTACC TAAAGAACAT GAAGCTTACA TTAAGCCTTT TATTACTGAT AAGGATATTT GCTTAGTACC TTTGGTGTCA TTAACCACAC CAATTTCTCG TCAGAAAGAA CTTGTAGTAG ATGCCGAAGG ATTCATTTAT GCCGTTGCGA TCAATGGAGT AACCGGAAAA GAAAATGCTT ATAGTAATCA ACTTGACCAT CATTTAGAAA CATTGTCTAA ATTAACTGAT ATTCCTGTTT TGACAGGATT TGGGATTTCA ACTTTAACAG ATGTTGAACG TTTTAATAAG GTATCAGCAG GAGTAATCGT TGGTTCAAAA ATAGTTAGGG ATTTACACGA AAACAAAGAA AGTGATGTTA TTAAATTTAT TAAAAACGCA ATCAATTTTT AA
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Protein sequence | MKTLQAKLSN KKNNFVPYIM AGDHERGLEG LNETIQLLEQ AGSSAIEIGV PFSDPVADGP VIEQAGLRAL AKNVSLSKIL DSLKSIETEV PLVIMTYFNP VYQFGIENFV AALENTAVKG LIIPDLPKEH EAYIKPFITD KDICLVPLVS LTTPISRQKE LVVDAEGFIY AVAINGVTGK ENAYSNQLDH HLETLSKLTD IPVLTGFGIS TLTDVERFNK VSAGVIVGSK IVRDLHENKE SDVIKFIKNA INF
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