Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0897 |
Symbol | |
ID | 4433565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 839879 |
End bp | 841330 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639666657 |
Product | hypothetical protein |
Protein accession | YP_808868 |
Protein GI | 116511652 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.225071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAA AAAATTCATT TCGAACATGG AAATCTGGCA AAACTTGGTT GTATTCATCT TTAATCTTAG GTGGTTTACT GCTAAGTTCA GGCTTATCTA TTAACCCAGC AAAAGTATCA GCTGAAACAA TGGGAACCAA AAGTAGTCAA ATGACCTCGG CAACTGATAT TACAATGGGA CTTCAAGCAA ACCTCAAAGC GACAACAACC ATATCAGCAG CACAATTGGC AAACGCTCAA GCACCTGGTC CGTTCACAGC AGGTGTTAAT CAAGTGATTC CTTTTGAAGC TTTTGGGGGA GACGGGATGC TAACACGTCT GTTACTTAAT TCTTCAAATA ATGCGGCTTG GTCTGACAAT GGAACAGCTA AAAATCCAGC ACTTCCCCCA ATTTCAGGTC TTGAATCAGG AAAATACTTT TATGAAGTTG ACTTAGCAGG TACAAATGGA GCGACAGGTC AAAATCTACT TGATTTATTA CGAGCTAATG GAAGCAAAAA TTATGAAGCG ACCGTAAAAG TTTATGCTGC AGACTCTTCG GGAAAGGCAG ATACTAGCAA AGTAGTTGCT ACTAAAATGA TTCAGGTGGA TTTGGCTGGA TTGACGGATA ACATTAAGAA CACCACAACC GTATCAGCAG CAAAATTAGC AAACGCGCAA GCACCTGGTC CGTTCACCGC GGGAGTTAAC CAGGTGATCC CTTTTGAAGC TTTTGGAGGA GATGGAATGT TAACGCGTCT GTTACTTAAC TCTTCAAATA ATGCAGCTTG GTCAGACAAT GGGACAGCTA AAAATCCAGC ACTTCCTCCA ATTTCAGGTC TTGAATCAGG AAAATACTTT TACGAAGTGG ACTTAGCAGG TACAAACGGA GCGACAGGTC AAAATCTACT TGATTTATTG CGAGCTAATG GCAGCAAAAA TTATGAAGCG ACTGTAAAAA TTTATGCTGC AGACTCTTCG GGAAAGACAG ATACTAGCAA AGTAGTTGCT ACTAAGATGA TTCAGGTTAA CTTGACTAAG GAACAAAATA CGGTTGCTAG TCAAGAGGTC TATCGTTTAT ACAATAAAAT GAGCGGAGAA CATCTTTATA CAACAAGTGC CTATGAATAC AATACTCTTA CAATGACAAA TAGTAGTTGG TCAGGCGAAA AAGTAGCTTG GAAAGCACCA AAAACTGGTA ATAATGTTTA TCGAGTTTAT AATCCAAATT CTGGAGAACA TCTTTATACA GAATCATCAT TTGAAGTAAA TAGTTTAGTA AAACAAAATG GTTGGAAATC AGAAGGAGTG GCCTTTCATT CGGATTCAAA CAGCGGAACA CCGGTTTATC GTCTCTACAA TCCTAATTCA AAACTCGGTG CTCACTTCTT GACAATGAGT TCATATGAAC GAGATAGCCT GGTCAAAGCT GGTTGGAAAT CAGAAGGAAT TACTTTTTAT GCGATAAAAT AA
|
Protein sequence | MKTKNSFRTW KSGKTWLYSS LILGGLLLSS GLSINPAKVS AETMGTKSSQ MTSATDITMG LQANLKATTT ISAAQLANAQ APGPFTAGVN QVIPFEAFGG DGMLTRLLLN SSNNAAWSDN GTAKNPALPP ISGLESGKYF YEVDLAGTNG ATGQNLLDLL RANGSKNYEA TVKVYAADSS GKADTSKVVA TKMIQVDLAG LTDNIKNTTT VSAAKLANAQ APGPFTAGVN QVIPFEAFGG DGMLTRLLLN SSNNAAWSDN GTAKNPALPP ISGLESGKYF YEVDLAGTNG ATGQNLLDLL RANGSKNYEA TVKIYAADSS GKTDTSKVVA TKMIQVNLTK EQNTVASQEV YRLYNKMSGE HLYTTSAYEY NTLTMTNSSW SGEKVAWKAP KTGNNVYRVY NPNSGEHLYT ESSFEVNSLV KQNGWKSEGV AFHSDSNSGT PVYRLYNPNS KLGAHFLTMS SYERDSLVKA GWKSEGITFY AIK
|
| |