Gene LACR_0748 details

Gene Information

• Locus tag: LACR_0748
• ID: 4432223
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: -
• Start bp: 695393
• End bp: 697387
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 639666518
• Product: ABC transporter permease/ATP-binding protein
• Protein accession: YP_808730
• Protein GI: 116511514
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGTTT TGGAATTAAA AAATATTAGG AAATCTTATT TTCTTGGAAA AGAAGAATTT 
CCTGTCCTCA AAGGAATCGA CCTCGAGTTT GAACGTGGTG ATTTCGTCAG TCTCCTAGGG 
GAATCTGGGG GAGGAAAGTC AACTCTGATG AATATCATTG GGGGGCTTGA CCGTAAATAT 
GAGGGGGACG TTATCGTTGA TGGCCTTGCT CAAAAAACAA AAAAAGAAAA AGATATGGAT 
GCTTATCGCC GAGATACTAT CGGTTTTATC TTCCAATCTT TCAACCTTGT CAGCTATTTG 
AGCGTTTTAG ATAACATTTT AATTAGTCTT AAAATGACTA GTTTATCTGA CAAAGAACGT 
CATGAAAGAG CGATTGAGCT GACCAAGCAA GTTGGACTCT ATGAACATCG TAAGAAAAAT 
CCATCACAAC TTTCTGGTGG ACAAAAACAA AGGGTAGCCA TTGCGCGTGC CTTGGCTTCT 
GACCCTGAAA TTATTCTTGC TGATGAACCA ACAGGAGCGC TTGACTCACA AAATACAAAA 
GAAGTTTTAG CACTTCTACG TCAAATTGCC CAATCTGGTA AAACAGTCAT TGTCGTAACC 
CACTCACAAG AAGTTGCTGA CTATGGAACT CGAATTATCC GTTTGGCCGA TGGACAAATC 
ATAGGTGACG AACGTCTAAA ACCGCCTTAC CCTGTTGAAT CACATCAACG AATGCAATCA 
AAAGCACTCT CATATCGTGA TACTTTCAGA ACGGCCTTTA AACACTTTAC CCACTCTTGG 
AAAATCAATT TATTAATTGC AATCGGAACC GCAATCGGTC TTTTCTCAGT TATCTTCTTC 
TTAGGACTAG GAAATGGGGC GACCAAATAT ATGAATGACA CCATCACTTC GAGTGTCAAT 
CCAAATGTGG TCACCATCTT CAAGCGAACA ACAACAGATA ATAAGTTAGG AAATGAGCAA 
GCCCTGCAAC AAACTCAACA AGAGCTTGGA AATGCTTCTA CCAATCTTGA CAGTGATCAT 
CTTTCAAAAT TGAAAAAAGT AGATAATGTC AAAAAAGTTG AACCAACCTA TTCTATTTCT 
GGTTTAGGCA CACTTACTAA CAATGACAAA TCTAAATCTG GTTTAATTAC TCTTGATACT 
TGGACACAAT CAAATATTAA TGATGATTAT GTTTCTGGTT CAAAACCAGC TGATGGCGAA 
ATTGCAATCT ATGCGAAGGA CGCTAAAGAG TTAAATAAAG ATTATAAATC ATTAGTCGGT 
AAGAAAATTA CTTTGAAATT TCCAGCTAAA ACAGCTGCTG GCGCAAGTGT TGAAGTGACA 
AAAGAATTCA CTGTTTCAGG TATTTTGAAA GACCCTCAAG GTCCTGCAGG TTCTTCTAGC 
AGCGTTATTG CTACTTATAA TACTGTAAAA TCTGCTCTTG AAGCTGCTAA TGCTGACACT 
GATGCAACTT ATGCTGTAGT AACAGTTAAT AAAGTAGATA ATGTCAAATC AACTACTTCT 
GATATTCAAG ACTTGAAGAT TGATGGAACA AAAGCTTTTG TTACTTACAG TGTTACTTCA 
TTCCTTGATG TAATCACTAA TATTACTAAC ATTGTCAGCT ATGTCCTTGC AGCTATTGCT 
GGTATCAGTT TGATTGTTTC AATCTTTATG ATTGTCGTTA CAACTTATAT GAGTGTTGCT 
GAACGTACAA AAGAAATTGG TGTTATCCGT GCACTTGGTG GACGTAAGAA AGATATTTCT 
CGCCTATTCA CCGCAGAAAG CTTGATTCTT GGTCTTTCAT CAGCTGCTAT TGCCATCGGA 
TTTGCTTATC TGGGACAATT CCTCATTAAC AAAGTTTTGA GTAGCTTCCT TGAAGGAGCA 
AGCATTGTTC AAATCTCTGG TGGTCACATC ATCTTTGCAA TCATCATTGC CGTTTTGATT 
GCCCTATTGG CAAGCTTAGC TCCAAGTGGT CGTGCAGCAC GTTTGAATAC AATTGAAGCA 
CTTGCTTCTG AATAA 

 

Protein sequence

MAVLELKNIR KSYFLGKEEF PVLKGIDLEF ERGDFVSLLG ESGGGKSTLM NIIGGLDRKY 
EGDVIVDGLA QKTKKEKDMD AYRRDTIGFI FQSFNLVSYL SVLDNILISL KMTSLSDKER 
HERAIELTKQ VGLYEHRKKN PSQLSGGQKQ RVAIARALAS DPEIILADEP TGALDSQNTK 
EVLALLRQIA QSGKTVIVVT HSQEVADYGT RIIRLADGQI IGDERLKPPY PVESHQRMQS 
KALSYRDTFR TAFKHFTHSW KINLLIAIGT AIGLFSVIFF LGLGNGATKY MNDTITSSVN 
PNVVTIFKRT TTDNKLGNEQ ALQQTQQELG NASTNLDSDH LSKLKKVDNV KKVEPTYSIS 
GLGTLTNNDK SKSGLITLDT WTQSNINDDY VSGSKPADGE IAIYAKDAKE LNKDYKSLVG 
KKITLKFPAK TAAGASVEVT KEFTVSGILK DPQGPAGSSS SVIATYNTVK SALEAANADT 
DATYAVVTVN KVDNVKSTTS DIQDLKIDGT KAFVTYSVTS FLDVITNITN IVSYVLAAIA 
GISLIVSIFM IVVTTYMSVA ERTKEIGVIR ALGGRKKDIS RLFTAESLIL GLSSAAIAIG 
FAYLGQFLIN KVLSSFLEGA SIVQISGGHI IFAIIIAVLI ALLASLAPSG RAARLNTIEA 
LASE