| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0422 |
|---|
| Symbol | |
|---|
| ID | 4433357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 393305 |
|---|
| End bp | 394126 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 639666216 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_808450 |
|---|
| Protein GI | 116511234 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00307328 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCAT TATTTGAGAC TTTTATCGTT GTTTATGAAA CTAAAAGTTT TACCTTAGCC
GGAAAATATT TATTTATTTC ACAACCTACT GTAACCGTGA GAATCAAAAA ACTTGAAGAA
GAATTAAAAT CAACATTATT TCTAAGGGGA AAACACCAAG AAATCATTCC GACTGAAGCC
GCAATATTAT TTTATCCCAA AGCGATTGCC TATCTAAAAA AATGGGAGGA AGACCAAGCG
GAGGTACAAA AGAAATCTCT TGCAAAACAT CCTTTCAAAA TCGGAGTTTC ACATAGTGCT
GCTTTAAGTA TTATGCCAAG AATTTTTAAA GTATTTGAAG AAGAGTTGGA ACAATTGGAT
GTAGAAATTA ATATGTATGA CTCAGAAAAA GTATTTGAAT TAGTTGCAAA TCATGATTTG
CATTTTGGAA TCATTGAACG ATTACTCATT AGTGATCAAA CCGAAACCTT TCCTTTGTTT
TTAGATGAGT TGGTCCTTGC TGGAAATACA GATTCAGAAA CTTTCTTTAC CAGAGAATCT
GGTTCAGGAA TTGGATATTA TATCAAAAGA TATCTCAAAT CTGCTCCTTC TTCTAGAAGA
AAAATTGTTC GTATGAATAG TAATGAGATG ATTATTTCCC ATATCAAATC TGGTTTAGGT
TCTTCTTTGA TTTCTAAATC CTTTTTATCT GATGATATCC CTTATCAAGA ACTTGGAAGT
AATTATCATA GAGAGTTTTT AGGAGTTTCT TTTGATGAAG AAAAAGACCC CGTGATTCAA
AAATTAATTA ATAAAATAAA AAAAGAAACC GAAATTCGTT AG
|
|---|
| Protein sequence | MFSLFETFIV VYETKSFTLA GKYLFISQPT VTVRIKKLEE ELKSTLFLRG KHQEIIPTEA
AILFYPKAIA YLKKWEEDQA EVQKKSLAKH PFKIGVSHSA ALSIMPRIFK VFEEELEQLD
VEINMYDSEK VFELVANHDL HFGIIERLLI SDQTETFPLF LDELVLAGNT DSETFFTRES
GSGIGYYIKR YLKSAPSSRR KIVRMNSNEM IISHIKSGLG SSLISKSFLS DDIPYQELGS
NYHREFLGVS FDEEKDPVIQ KLINKIKKET EIR
|
|---|
| |