| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0145 |
|---|
| Symbol | |
|---|
| ID | 4432606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 128316 |
|---|
| End bp | 130259 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639665949 |
|---|
| Product | 1,4-alpha-glucan branching enzyme |
|---|
| Protein accession | YP_808188 |
|---|
| Protein GI | 116510972 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTAA ATATCTTGGA TTATGACCCC TATTTAGAAC CTTTCAAAGA TGACTTGTCT
TTACGCCTCT TTGAATTTGC TAGAACTAAG AAACGGATTT TGGACGTTGA TGGTTCTTTA
GTTGATTTTG CTAACGGCTA TAAGTATTTT GGCTTCCAAC AAGAAAGTAA ACACTGGACT
TTCCGCGAAT GGGCACCAAA TGCTAAAAAA GCTTGGCTTG TTGGTGACTT TAACAATTGG
GAAAACAACT ATGAACTAAA ACAGGCTTAT GGCGGGACTT GGGAAATTTC AGTTCCTGGA
TTATTACCTG TAGGTTCTAA AGTAAAAATA AAGTTGCTTT TGCCAACTGG AGAAGTTGTT
TATCGTGTTC CTTCTTACAT TATGTATGCT CTTCCTAATG AAAATCATGG TTTAGACGGG
GTTATTACTC AGCCTAAGTA CGAATGGAAA AATAAAAGCC CTAAACTAAG CGAAGCACCT
TTGATTTATG AGGCACATAT TGGGATTTCA ACCGAAGAAT ACAAAATTAA TTCTTACAAA
GAATTCACGC GCGATGTTTT ACCCAGAATT AAAAAAGATG GTTACAATAC CATTCAGCTG
ATGGCAATTA TGGAACACCC GCTCTATGCT AGTTTTGGTT ATCAAGTTTC CAATTTTTTT
GCCATCTCTA GTCGCTTTGG TCAGCCAGAA GATTTAATGG AATTGATTGA TAAGGCACAT
GGTTTGGGTT TGCAAGTGCT TTTAGACGTG GTTCATTCAC ATGCTGTAAA AAATATTGAG
GATGGGCTCA ACTATTTTGA TGGAACAGAA AATCAGTATT TTCATGAAGG CGAACGGGGA
AATCATCCAG CTTGGAAGAC GAAACTTTTT AATTATGGCA AAGATGAAGT CCTTCATTTT
TTACTATCAA ATCTAAAATT TTGGCTAGAC ATTTATCATT TCGATGGCTT TCGTTTTGAT
GGAGTAACTT CAATGCTTTA TCATGACCAT GGTTTAGGAA CTGCTTTTAC AGATTATAGT
AAGTATTTTT CACTTAATAC GGATGTTGAA GCCGTGACAT ATTTGATGCT GGCTAATGAA
CTAACTCATC TCTTTAATCC ATCAGCAACA ACAATCGCTG AAGACATGTC TGCCATGCCT
GGGATGGCAC TACCTATCTC GGCTGGCGGA ATTGGTTTTG ATTATCGTTT GTCAATGGGA
ATTCCTGATT TTTGGATTAA ACAATTGAAA GAAAAAACAG ATAATAGTTT AGATTTGCTA
AGTTTATGGT GGGAATTGAC GACCAGACGA CCTGGAGAAA AAAATATCGG TTATTCAGAA
AGTCATGATC AAGCTTTAGT TGGAGATAAA ACACTGATGA TGTGGCTAGC TAATGAAGAA
ATCTATTGGA ACATGGACAT CAATAGTCAA TCTCTGATTA TTGACCGTGC CATTGCCCTC
CATAAGTTAA TTCGATTGAT TACTTTCAGT CTAGCAGGTG AAGGTTATTT AAATTTCATG
GGAAACGAAT TTGGTCATCC TGAATGGCTC GATTTCCCTC GAGAAGAAAA TCATGATGAT
TTTCAACATG CTAGAAGACA ATGGTCACTT GCTGATAACG AAAATTTACG TTTCAAATAT
TTACTGGCAT TTGACCAAGC CATGCTCAAT TTAGAACATG ATTTCAAATT TTTAGAAAGT
ACAGATCCTG TTCAACAGCT TTGGATTAAG GATTCGGATA AATTACTGGC ATACAAAAAA
GGACAATTAG TTTTTGTCTT TAATTTCCAC CCTAGTTATG AGCAAAAACT TCAGCTCCAA
TTTTCTAAAA AACCAGAACT TATCTTTGAC AGTGATGATC AAAAATTCGG AGGATTTGGT
CCCCGAAGTA GTTTTGGTTG GTCAAAAGGA ACTTTAAATT TGATTCTTGA ACCTAGAACA
GCGATGGTGT TTAAAATTAA ATAG
|
|---|
| Protein sequence | MPLNILDYDP YLEPFKDDLS LRLFEFARTK KRILDVDGSL VDFANGYKYF GFQQESKHWT
FREWAPNAKK AWLVGDFNNW ENNYELKQAY GGTWEISVPG LLPVGSKVKI KLLLPTGEVV
YRVPSYIMYA LPNENHGLDG VITQPKYEWK NKSPKLSEAP LIYEAHIGIS TEEYKINSYK
EFTRDVLPRI KKDGYNTIQL MAIMEHPLYA SFGYQVSNFF AISSRFGQPE DLMELIDKAH
GLGLQVLLDV VHSHAVKNIE DGLNYFDGTE NQYFHEGERG NHPAWKTKLF NYGKDEVLHF
LLSNLKFWLD IYHFDGFRFD GVTSMLYHDH GLGTAFTDYS KYFSLNTDVE AVTYLMLANE
LTHLFNPSAT TIAEDMSAMP GMALPISAGG IGFDYRLSMG IPDFWIKQLK EKTDNSLDLL
SLWWELTTRR PGEKNIGYSE SHDQALVGDK TLMMWLANEE IYWNMDINSQ SLIIDRAIAL
HKLIRLITFS LAGEGYLNFM GNEFGHPEWL DFPREENHDD FQHARRQWSL ADNENLRFKY
LLAFDQAMLN LEHDFKFLES TDPVQQLWIK DSDKLLAYKK GQLVFVFNFH PSYEQKLQLQ
FSKKPELIFD SDDQKFGGFG PRSSFGWSKG TLNLILEPRT AMVFKIK
|
|---|
| |