Gene Ksed_24480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24480 
Symbol 
ID8373951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2528556 
End bp2529515 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID644992674 
ProductL-proline dehydrogenase 
Protein accessionYP_003150178 
Protein GI256826218 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGTTC TCGACCCGTC CGCCCTGATG CGGGATGCGT TCCTGGCCAT GAGCCGTCAG 
ACCGCCGTCC GCGACACCAT GGTGAAGATG CCCGTGACCA ACAAGGTGGT CTCGCGCTAC
GTGCCCGGTG AGGACTTCGC CGACGCGGTG CGGGACTGCG CGAACCTGGT GGCCCAGGGC
CGCACCGTGA CCGTCGACCA CCTCGGGGAG GACATCACCG ACCTCGCCCA GGCGACGGCC
ACCAAGGACG CCTACCTGCG CTACATCAAG GACATGAGCA ACGCCGGCCT GAGCACCGAC
GGCACGGTCG AGTTCTCGCT GAAGCTGAGC GCGCTGGGCC AGTTCGTGGG CAAGGACGGG
GAGAAGGTCG CCCTGGAGAA CGCCCGCGAG ATCGCCCGGG CGGCGGCGAA CGCCGGCACC
ACGATCAGCC TCGACATGGA GGACCACACC ACTACCGACT CGACGCTGGG CATCCTGCGC
GAGCTGCGCC AAGACTTCCC CGGCACCGGT GCGGTGCTGC AGGCCTACCT CCACCGCACC
CAGGCCGACT GCCGCGACCT GTCCGGCGAG GGCAGCCGGG TACGCCTGTG CAAGGGCGCC
TACGCCGAGC CCGAGTCCGT GGCCTTCCAG GACGACCACG AGGTCGACCT GAACTACGTG
GAGTGCGCCA AGATCCTGAT GAACGGTCAG GGTTACCCGA TGATGGCCAC GCACGACCCG
AACATGATCG ACATCGCCGG CTTCCTGGCC GACTCCGCGG GCCGCTCCAC GGACTCCTGG
GAGTACCAGA TGCTCTACGG CATCCGGCCC CACGAGGAGG GCCGCCTCAT CGACGAGGGC
TACCAGGTGC GGGTCTACCT CCCCAACGGG CCGGACTGGT ACGGGTACTT CATGCGCCGC
CTGGCCGAGC GTCCGGCGAA CGTCATGTTC TTCGCCCGCT CGCTGCTCTC GAAGGGCTGA
 
Protein sequence
MSVLDPSALM RDAFLAMSRQ TAVRDTMVKM PVTNKVVSRY VPGEDFADAV RDCANLVAQG 
RTVTVDHLGE DITDLAQATA TKDAYLRYIK DMSNAGLSTD GTVEFSLKLS ALGQFVGKDG
EKVALENARE IARAAANAGT TISLDMEDHT TTDSTLGILR ELRQDFPGTG AVLQAYLHRT
QADCRDLSGE GSRVRLCKGA YAEPESVAFQ DDHEVDLNYV ECAKILMNGQ GYPMMATHDP
NMIDIAGFLA DSAGRSTDSW EYQMLYGIRP HEEGRLIDEG YQVRVYLPNG PDWYGYFMRR
LAERPANVMF FARSLLSKG