7 homologs were found in PanDaTox collection
for query gene Ksed_20330 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_20330  hypothetical protein  100 
 
 
82 aa  164  4e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.322211  normal  0.210467 
 
 
-
 
NC_012803  Mlut_06200  hypothetical protein  84.15 
 
 
82 aa  142  1e-33  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4394  hypothetical protein  46.94 
 
 
154 aa  43.9  0.0008  Salinispora tropica CNB-440  Bacteria  normal  normal  0.601015 
 
 
-
 
NC_009921  Franean1_7220  hypothetical protein  51.22 
 
 
75 aa  43.5  0.0009  Frankia sp. EAN1pec  Bacteria  normal  0.128319  normal 
 
 
-
 
NC_013530  Xcel_1602  hypothetical protein  62.5 
 
 
88 aa  43.5  0.001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4305  hypothetical protein  44.19 
 
 
192 aa  42.4  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.155618 
 
 
-
 
NC_009953  Sare_4880  hypothetical protein  42.86 
 
 
158 aa  41.6  0.004  Salinispora arenicola CNS-205  Bacteria  normal  0.407704  normal  0.459032 
 
 
-
 
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