Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_20080 |
Symbol | |
ID | 8373512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2086387 |
End bp | 2087739 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644992259 |
Product | predicted membrane protein |
Protein accession | YP_003149769 |
Protein GI | 256825809 |
COG category | [S] Function unknown |
COG ID | [COG2311] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0149559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCCG CCATCCGCGC CACCGAGTTC GTCTCGGACG CCGCCACCTC CTTCGACTCC CTGGACGGGC CCAACACCGG TCTGAGCACC GAGGTCGTCC CCGACACCCC GCACGCGTGC GAGCCGGCGG GGCGGGCGAC CCCGGAGGAC CAGGGGCCGA CGGAGCACCG CCTGACCGGT CTCGACGCGG CCCGAGGGCT GGCGCTGCTG GGCATGATAT CGGTCCACAT CTTTCCCGCC TTCACCCCCG AGATCACGGT CCACCCCGCG TGGACGGTGG CCTCGGGCAC GGCCTCGGCG CTCTTCGCCG TCCTCGCCGG AGTGTCGCTG GCGCTCATGA GCGGGGGATC GCGGCCGCTC TCCCGGGGCC GCTGGACGCC GATGCTGCGG CAGGGGGTGC GGGCGATCCT CATCCTGGCC ATCGGCCTGA TCATGGGGCT GATCATCCCG GTTGACGCGG CCGGCGTGAT CCTGCCCTAC CTGGCGGCCC TGTTCGCCCT GGCGATCCCT TTCCTCGGGC TGCGCGCCAG GCCGCTCTTC GTCCTCGCCG CGGTCGGGGC CGTGCTGGGC CCGGTGCTGA GCTACTGGCT CCGGCAGGGC GACCCGGTGC CGGACCTGGG CAACCTGGTC CCCGGGGACC TGTTCACGCG GCCGCTCGAG TTCCTGGAGA CCCTGGTGGT CACCGGACTC TTCCCCGCCC TGAGCTGGCT GCCCTACATC CTGCTGGGGA TGGGCATCGG CCGCCTGCGG CTGCGGCGGC GCATCTCGGC GGTGCACCTG GCGCTGGCCG GCGTGGCCGT CACGGCCCTC TCCTGGGTGG TCTACCAGGT GCTCACCGGG CCGCTGGGGG CGCTGGAGCA CGTGGCCGAG GGGCAGATGG CAGCCGGGTG GACCCTGGAC GAGACGGCTG ACCTCCTCGT CTGGGGGCCG GACGGCACCG TCCCCACCAC CTCCTGGTGG TGGCTCAGCA CGATCGCCCC GCACAGCGGG ACGCCGGTGG ACCTGCTCCG CACCAGCGGT GTCGCCCTCC TGGTGATCGG CGTCATGCTC GGGCTGGGGA CCCTGCTCTC GCGGTCGCTG CTGCTGCTCA CGGCGCCCGG ACGCATGACC CTCACGCTCT ACTGCCTGCA CCTGCTGATG CTGCTGCTCC CCCTGGAGAC CTTCGGGGTG GGGGTGGAGT TCGCCCTGCA GGTGCTGGTC GTCGTCGTCT TCGCGCTGGC CTGGCTGAGC GTGCAGCGGC AGGGACCGTT GGAGTGGCTG GTGGGTCATG CCACCCGGGC GCTCGTCCCC GCCTCCTTCG TCGCGCGGCG ACGGGTCAGA CGTTGGGGGA GACGTCCTTG GCCGAGGGGG TGA
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Protein sequence | MSPAIRATEF VSDAATSFDS LDGPNTGLST EVVPDTPHAC EPAGRATPED QGPTEHRLTG LDAARGLALL GMISVHIFPA FTPEITVHPA WTVASGTASA LFAVLAGVSL ALMSGGSRPL SRGRWTPMLR QGVRAILILA IGLIMGLIIP VDAAGVILPY LAALFALAIP FLGLRARPLF VLAAVGAVLG PVLSYWLRQG DPVPDLGNLV PGDLFTRPLE FLETLVVTGL FPALSWLPYI LLGMGIGRLR LRRRISAVHL ALAGVAVTAL SWVVYQVLTG PLGALEHVAE GQMAAGWTLD ETADLLVWGP DGTVPTTSWW WLSTIAPHSG TPVDLLRTSG VALLVIGVML GLGTLLSRSL LLLTAPGRMT LTLYCLHLLM LLLPLETFGV GVEFALQVLV VVVFALAWLS VQRQGPLEWL VGHATRALVP ASFVARRRVR RWGRRPWPRG
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