Gene Ksed_12960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12960 
Symbol 
ID8372804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1336799 
End bp1337263 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content75% 
IMG OID644991573 
Producthypothetical protein 
Protein accessionYP_003149092 
Protein GI256825132 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.552344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.38168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC CCACCCCCTC CCCCAGCGCC CCCCGTCCTC AGGCTGCGCC CACCGTCGAG 
CAGGAGATGG CGCGGGTCTT CTCCGCGGGT CCCGGTGCGC TGTCGACCCG GATGGGGATC
GAGGTCACCG AGGCGACTCC CGAGCGGGTC GCGGCCTCCA TGCCGGTGGA GGGCAACACC
CAGCCCTACG GCCTGCTCCA CGGCGGGGCG AGCGTGGTGC TGGCCGAGAC GGTGGGCTCC
ATCGCCGCCG CCCTGCACGC CGGGCCGGAC CGGGCCGCCG TCGGGGTGGA CATCAACGCC
ACCCACCACC GCGCCGTCCG CAGCGGCTCC GTGCACGCCG TGGCCACCCC GGTGCACCGC
GGCCGCTCGT CGGCCACCTA CGAGATCGTC ATCACCGACG ATGCGGGCAA GCGCGTCTGC
AGCTCCCGCC TCACCTGCTC GTTGTTGACC GCGCCGCGCG GCTGA
 
Protein sequence
MSEPTPSPSA PRPQAAPTVE QEMARVFSAG PGALSTRMGI EVTEATPERV AASMPVEGNT 
QPYGLLHGGA SVVLAETVGS IAAALHAGPD RAAVGVDINA THHRAVRSGS VHAVATPVHR
GRSSATYEIV ITDDAGKRVC SSRLTCSLLT APRG