Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_10940 |
Symbol | |
ID | 8372602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1117026 |
End bp | 1120679 |
Gene Length | 3654 bp |
Protein Length | 1217 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644991372 |
Product | condensin subunit Smc |
Protein accession | YP_003148899 |
Protein GI | 256824939 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.638543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.192819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTACGTGA CGTCCCTGAC CCTCAAGGGG TTCAAGTCGT TCGCCTCGTC CACGAAGCTG GAGCTCGAGC CGGGCATCAC CTGCATCGTG GGGCCGAACG GCTCGGGCAA GTCGAACGTC GTGGACGCGC TGGCCTGGGT GATGGGGGAG CAGGGCGCCA AGTCGCTGCG CGGCGGCAAG ATGGAGGACG TCATCTTCGC CGGCACCTCC GGGCGGGCCC CGCTGGGCCG CGCCGAGGTG GCCATGACCA TCGACAACAC CGACGGTGCC CTACCGATCG ACTACTCCGA GGTCACCATC AGCCGGACCA TGTTCCGCAG CGGCGGCTCG GAGTACGCCA TCAACGGCAC CCCCTGCCGC CTGCTGGACG TGCAGGAGCT GCTCAGCGAC TCCGGCATCG GGCGCGAGAT GCACGTCATC GTCGGGCAGG GCCAGCTCGA TGCGGTGCTG CGCGCCACCC CCGAGGAGCG CCGCGGCTTC ATCGAGGAGG CCGCGGGCGT CCTGAAGCAC CGGCGCCGCA AGGAGAAGGC GCTGCGCAAG CTCGACGCGA TGGAGGGCGA CCTCGCCCGG GTGCGCGATC TGACTGCGGA GATCCGCCGG CAGCTCGGTC CGCTGGGGCG GCAGGCGGCC ACCGCGCGGC GGGCGGCGGT CATCCACATC ATGGTCCGCG ACGCCCGGGC CCGGCTGCTG GCCGACGACC TGGTGCAGCA GCAGGCGGCG CTGGACTCCG ACCTCGCCGA CGAGCAGGCT GCCCTGGCCC GCCGGCAGCA GGCCGAGCAG GCGCTGGCCG CCGCCTCCGG GGGCGTGGAG GAGCTGGAGC AGTCGGTCGC CACCGCCGAC GGGCGCCACG AGGCCTTCCG GAACGCGTGG TTCGAGCTGG GCACCCTCAT CGAGCGCACC CGCGCCGCCG GACGGCTGGC CGCCGAGCGC GCGACCCTGG CCGACCGCGA CGCCACCGAG TCCGAACAGC GCAGCCGCAG CGGTCGTGAC CCCGAGCAGC TCCAGGCCCA GGCCGCCGAG CTGAAGCAGC AGGAGGCCGA TGAGGCCGCC CGCATCGATT CCACCGAGGA CGAGCTCGCC GAGGCGACCA GCGCCCGCGA GCAGGCCGAG GCCGCGCACG CCGCCGAGGC GCAGCGCCTG GAGCGGTTGG CCAAGGCGGC AGCGGACCGC AGGGAGGGCC TGGCGACGCT GGCCGGCCAG GTGGAGGTGC GTCGCTCGCG GGTGGCCTCG GCGCAGACGG AGATCGAGCG CCTGGAGGCC GACATCGCCG CCGGCGAGCA GCAGGCCCAG GCGGCGCGCG ACCGCCTGGC CGAGCTCGAG GGCGGCATGG AGGAGGCCGA GTCCGGGGAG GCCGGGTTGG ACGCCGCCCA CGAGGCCGCG CAGGAGGCCG TGGAGGCCGC TGCGGCCGAG CTGGAGCAGG CCCGCAACCG GCTGAACAAC GCCGGGCAGA AGGCTCAGCG CCTCACCGCC CGGGTGGAGG GCCTATCCGT CGCCCTGCAG CGCCGTGACG GGTCGGCGAC GCTCGTGGCC GAGGGTGCTC CCGCCGGCGT GCTGGGGGAC CTCACGGACC ACCTCCAGGT CGAGGCGGGC CACGAGGCCG CCCTGGCCGT GGCGCTGGGC CCGGTGGCCA CGGCGCTCGT GGTGCAGAGC CGCGGGGCGG CGACCGCCGC GCTGGAGCAC CTGGCGGCCC GGGAGGCCGG GCAGGCGACG CTGGTGCTCT CCGCCGGCTC CGATGCGGGG GAGCCGGTGC CGCTCTCCGG CGCGGGGGGT CCCGACGGGG CGGCCGGCCC GGGCGGTGGG CAGCCCGGCC GTGGTGAGCT TCCCGGTGTG GCCGTGTGGG CCACCGGGGT GGTGCGGGTG CCCCCGGTCC TGGCGGGGGC GCTGGGCGAG GCCCTCGACG GCGTGGCCCT GGCCGCGGAC GCCGAGGCCG CGCGGGCGGT GCTGGACGCC ACCCCGGGTG TGCGGGCGGT CGCGACGGCC ACCGGTGAGC TGTGGACGCG CCACCGGGTG ACCGGCGGGT CGTCGACCGG CCCCTCGTCG GTGGAGGTGG CGGCCGACCA CGACCGGGCG GTGGCCGAGC TGGAGCAGGC ACAGCAGGAG GTCGCCGCGG CCGAGTCAGC GCGGGATGCG GCCCAGGAGC GCCTCGCGGC GGCACGCCCG GCGGCCGAGG CGGCCCTGGC GGCCCTGCAC GAGTCCGACG CGCGCATGGC CGCGGTGGCC GACGACCTGG CCCAGGCGGC GCAGTCCGAG CGGGCGGCGC GCTCCGGCAT CGAGAAGGCC ACCGAACGCC TGGCGGCCCG CCGGACCGAG GCCGAGGCCG ACCGGGCCGA CCTGGAGGCG CTGGAGGCCC GGCTCGAGGC GGCCCGCACC CAGGACGCCC AGGCCCCCGA CGCCGCAGAC GACACCGCGG AGCGCGACCG GCTGGCCACG GCGGCGGCGC AGGCCCGCGC ACACGAGACC GAGGCGCGCC TGGCGGCCCG CACCGCGGCC GAACGGCTGA AGGCGATCGC CGGGCGCGGA GACGCCCTGG CGGCCCAGGC TCGCGGGGAG GTCCTGGCCC GGCAGGACGC CGCCCGCCGG GCCGGGCAGC GTCGTCGCGC CGCCGAGCAC GCCCGCGGCA TCGCCGAGCG GGCCGAGGCG TTGGTCGGCC GGTTGGAGGC CGTCCGCGAG CAGGCGGAGG CCGGCCGCCA GACCGCGGAG GCGCAGCGTG CCGAGCTGCG GCAGGAGCTC GCGGCGCGCC GCACCCGCAT CGCCGAGCTG ACCGAGCGCG TGCGGGAGCT GACCGATGCG GTGCACCGCG ACGAGGTCGC GCGCGCCGAG ATGCGCCTGC GCGTGGAGGC GCTCGTCCAG CGGGCCACCG ACGAGCTCGG CATGGAGGCC GAGGTGCTGG TGGCCGAGTA CGGGCCCGAG AACGAGGTGC CGGTCCTGGA CGACGACGGG GAGCAGACCC GCGACGAGGA GGGGAACCCG GCCACGGTCC CCTTCGTCCG CGACGAGCAG GCCAAGCGGC TGCGCCGCGC CGAACGGGAC CTCAAGGCCC TGGGCGCGGT GAACCCGCTG GCGCTGGAGG AGTACGCGGC GATGGAGGAG CGCCACCAGT TCCTGGCCGG GCAGCTCGAC GACCTCGTGG CTTCCAAGGA GGCACTGTTG GAGCTGGTGG CCGAGGTGGA CGAGCGGGTG CGCACCGCAT TCGTGGAGGC CTACCAGGAC ACCGCGCGGG AGTTCGAGGG CGTGTTCTCC CGGCTCTTCC CCGGCGGCGA GGGGCGGTTG GAGCTCACGG ACCCCGAGGA CATGCTGACC ACCGGCATCG AGGTGCAGGC CCGCCCACCG GGCAAGAAGG TCAAGCGGCT CTCGCTGCTC TCCGGTGGGG AGCGTTCGCT GACCGCGGTG GCGTTGCTGG TGAGCATCTT CAAGGCCCGG CCCTCGCCCT TCTACATCAT GGACGAGGTC GAGGCCGCGC TGGACGACAC CAACCTGGGG CGGTTGATCC AGCTCTTCGA GGAGCTGCGC GACTCCAGCC AGCTGATCGT CATCACCCAC CAGAAGCGCA CGATGGAGGT CGCCGACGCC CTCTACGGCG TCTCGATGAA GGGCGACGGC ATCAGCCAGG TGGTCTCCCA GCGGCTCAAG GACTCGCCCC TGCCGCGGGC TTGA
|
Protein sequence | MYVTSLTLKG FKSFASSTKL ELEPGITCIV GPNGSGKSNV VDALAWVMGE QGAKSLRGGK MEDVIFAGTS GRAPLGRAEV AMTIDNTDGA LPIDYSEVTI SRTMFRSGGS EYAINGTPCR LLDVQELLSD SGIGREMHVI VGQGQLDAVL RATPEERRGF IEEAAGVLKH RRRKEKALRK LDAMEGDLAR VRDLTAEIRR QLGPLGRQAA TARRAAVIHI MVRDARARLL ADDLVQQQAA LDSDLADEQA ALARRQQAEQ ALAAASGGVE ELEQSVATAD GRHEAFRNAW FELGTLIERT RAAGRLAAER ATLADRDATE SEQRSRSGRD PEQLQAQAAE LKQQEADEAA RIDSTEDELA EATSAREQAE AAHAAEAQRL ERLAKAAADR REGLATLAGQ VEVRRSRVAS AQTEIERLEA DIAAGEQQAQ AARDRLAELE GGMEEAESGE AGLDAAHEAA QEAVEAAAAE LEQARNRLNN AGQKAQRLTA RVEGLSVALQ RRDGSATLVA EGAPAGVLGD LTDHLQVEAG HEAALAVALG PVATALVVQS RGAATAALEH LAAREAGQAT LVLSAGSDAG EPVPLSGAGG PDGAAGPGGG QPGRGELPGV AVWATGVVRV PPVLAGALGE ALDGVALAAD AEAARAVLDA TPGVRAVATA TGELWTRHRV TGGSSTGPSS VEVAADHDRA VAELEQAQQE VAAAESARDA AQERLAAARP AAEAALAALH ESDARMAAVA DDLAQAAQSE RAARSGIEKA TERLAARRTE AEADRADLEA LEARLEAART QDAQAPDAAD DTAERDRLAT AAAQARAHET EARLAARTAA ERLKAIAGRG DALAAQARGE VLARQDAARR AGQRRRAAEH ARGIAERAEA LVGRLEAVRE QAEAGRQTAE AQRAELRQEL AARRTRIAEL TERVRELTDA VHRDEVARAE MRLRVEALVQ RATDELGMEA EVLVAEYGPE NEVPVLDDDG EQTRDEEGNP ATVPFVRDEQ AKRLRRAERD LKALGAVNPL ALEEYAAMEE RHQFLAGQLD DLVASKEALL ELVAEVDERV RTAFVEAYQD TAREFEGVFS RLFPGGEGRL ELTDPEDMLT TGIEVQARPP GKKVKRLSLL SGGERSLTAV ALLVSIFKAR PSPFYIMDEV EAALDDTNLG RLIQLFEELR DSSQLIVITH QKRTMEVADA LYGVSMKGDG ISQVVSQRLK DSPLPRA
|
| |