| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_07990 |
|---|
| Symbol | |
|---|
| ID | 8372308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 808890 |
|---|
| End bp | 810479 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644991083 |
|---|
| Product | site-specific recombinase, DNA invertase Pin |
|---|
| Protein accession | YP_003148618 |
|---|
| Protein GI | 256824658 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG CGACCCCGAC CCGCACGACC ACCAGCCCGA GCGCCGCTGT TCAGCGGTTG
CGGGTGGTGC TGTACGTCCG CATCAGTGAC GACCCCGAGG GCACCGAGAA AGGTGTCGAG
CGGCAGGAGG CGGACTGCCG CGATTATGCC GAGTCGCTGG GCTTCGAGGT GGTGGAGGTG
TTCCGGGAGG ACGACACCTT GGCGTTCAAG CAGCGCACGA TCACCCTCCC GACCGGGGAG
AAAGTGCGGC GTGTGGTTCG GCCACGGTTC CGGGCCATGC TGTCGTTCCT GACGCAGGGG
CGTGCGGAGG CGATGATCGC CTACGACCTC GACCGGGCCG TGCGCGACCC CCGCGATCTG
GAAGACCTGA TCGACGCCAA GGTGCTGTAC GGGTTCCGGG TGCTCTCCAC CACCGGCAGC
CTGCGCCTGG ACAACGACTC GGACATCGCG ATGGCGCGGG TGCTGGTGGA GATGGCGAAC
AAGTCGTCGG CGGACACGGC TCGACGGGTC GCCAGGGCGT CGAAGCAGCA GGCCATCGAC
GGCAAGTGGC ATGGTGGCCG CGCCCCCTAC GGGTACCGGA TGGGCGACTC GACGCTGTAT
GTGGTGCCGG AGCAGGCGGC GCTGGTGCGG GAGGCGGCGG ATCGTCTGCT GGCCGGGGAG
TCGGTCTACG CGATCATCCA ACGCTGGCAC CGGCGCGGCG AGTCCTCCGC GCTGGGGAAG
CGGTGGACGG AGAGCGCGTT GGTCCGGATC ATGCGCAACC CGGCGCTGAA AGGTGCCCGA
ACCTATCTGC CGATGCTGCC GGACGGGTCG CGCTCGACTG TTCCTGAGAC GGTCACCGAC
GGCAACTGGA CGCCGATCCT CGACGTGACC ACCTGGCAGC GGGTCAACGA CGTGCTCGCC
GCTCGCACCG CGAAGTCGCA GGGAGGGCCG GGAGCAATCA AGCGGGTCTA CCCGTTCACC
GGGCTGATCC GGTGCGCCGA GTGCGGCACC GCGATGTACC GGCAGGGCGA CTTCTACACC
TGCGGGAACA AGCAGTTCAA CACCTGCCAT CGCTCGGTGA AGATGACCGA GGTCACCGCG
CTGGTCGAGG ATGCGGTGCT GTCGGTCTTC TCCCGCCTTG CCCTGACCCC GGAGACGCTG
CCTGCCCGCG ACGGCAGCGA GACCGAGCGT GCACATGACG AGTTGTCGGT GCTGATCGAC
TCCGACCGGA CGGTGCTGAA CCGGCTCGAT GACGACCACT ACGACGGTCT GATCGACCGG
GCGACCTGGG CGCGGCAGCG CTCACGGCTG ACCGAGCGGA TCAGTACCCG GCAGCGGGAG
TATCAGCAGC ACCTCGCCCG CAAGCCCGTC CTGGACGTGG ACATCGACCT GGGCACGGTT
GCCTCGGAAT GGGCCGAGCG GACGGCGCAG TGGAAGTACG ACGCGGCCAG CATCGTGCTC
GAAGCCGTAC TCATCCACGG CCACCCCAAG GGCGTGTCTC CGATCGTCTC GCGTCGTCGG
GATGAGCCCG ACGAGACCTA TCAGGCGCGG TTGCGGGAGC ACCGGCAGAG CCTACTCGCC
CGCCGGGTCG AGTTCGTCTG GTGTGCGTGA
|
|---|
| Protein sequence | MSIATPTRTT TSPSAAVQRL RVVLYVRISD DPEGTEKGVE RQEADCRDYA ESLGFEVVEV
FREDDTLAFK QRTITLPTGE KVRRVVRPRF RAMLSFLTQG RAEAMIAYDL DRAVRDPRDL
EDLIDAKVLY GFRVLSTTGS LRLDNDSDIA MARVLVEMAN KSSADTARRV ARASKQQAID
GKWHGGRAPY GYRMGDSTLY VVPEQAALVR EAADRLLAGE SVYAIIQRWH RRGESSALGK
RWTESALVRI MRNPALKGAR TYLPMLPDGS RSTVPETVTD GNWTPILDVT TWQRVNDVLA
ARTAKSQGGP GAIKRVYPFT GLIRCAECGT AMYRQGDFYT CGNKQFNTCH RSVKMTEVTA
LVEDAVLSVF SRLALTPETL PARDGSETER AHDELSVLID SDRTVLNRLD DDHYDGLIDR
ATWARQRSRL TERISTRQRE YQQHLARKPV LDVDIDLGTV ASEWAERTAQ WKYDAASIVL
EAVLIHGHPK GVSPIVSRRR DEPDETYQAR LREHRQSLLA RRVEFVWCA
|
|---|
| |