Gene Ksed_04470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04470 
Symbol 
ID8371957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp440747 
End bp441946 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content74% 
IMG OID644990742 
Productamidohydrolase 
Protein accessionYP_003148285 
Protein GI256824325 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.171229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCC TCCCCCTCGC GGACCTCGCC GCACTGCGCG AGGCCTGGCT CTCCCACCTG 
ACCGCCGAGC TCACCGTCGC CCGTGCGGTG CGCGAGGAGG TCCACGCCGA CCCGCGCCTC
TCCGGTGACG AGGAGTCCAC GGCCGACCTC GTGGCCGACG CCCTGGAGAT CCCGATGCAG
CGCATCGCCG GCACCGGGCG CATCGGCCGC ATCGGTCCAC AGACGGGACC GGCCGTGATG
CTCCGCGCGG AGATGGACGC CCTCCCCATC GAGGAGGCCA CTGGCGCGCC CTTCGCCTCC
ACCAACGGTG CCATGCACGC CTGCGGCCAC GACGTGCACA TGGCAGCCCT GGTGGCCGTG
GTGCGTGCCG CTCGAGGCCT TGACCTCCCG GTGGGCCTGG TGCCCCTGCT CCAGCCGCGC
GAGGAGTCCG CCCCGCACGG CGGCTTCGAC GTGGTGAGCA GTGGACTCCT CGACGACCAC
CAGGTCGGCG TCTCGGTGGG CGCCCACGTG CACGCCGACG TGCCGCTGGG AAGCGTCGCG
ACCGGCGCCG GGGTGGTCAA CGCCGCCGCC GACAGCTTCC GCCTCAGCTT CGAGGGGGCC
GGCGGGCACG GCGCCTACCC CCACCACGGC AACGACGTGA TGGCGGCGAC GGCAACCACC
GCCCTGGGGC TACAGGACGT GGTGCGCAAG ACCGTCGACC CGATGCACCC GGTCACCCTC
ACCGTCGGAC ACCTCTCGGC CGGCCCCCCG GCCGACAACG TGCTGCCGGA GACCGGGCTG
ATCCTGGGCA CTCTGCGCAC GGTCAACGCC GAGGACCGGC AGCGCGTGCA GGACGCAGTC
CGCCTGCACG CCACCCGCAC CGCCGAGGCC TTCGGCGTCA CCTGCGAGGT GGTGCACACC
CGCGGCATGC CGGTGCTGGC CAACGACGAA GCCCTGGTGG GCTTCACAGA CCGCTGGCTG
CTGGAGTCCG GCATCCGGGC CGCGGAGCCG ATGCGGTCCA TGGGCGCCGA CGACTTCTCG
TTCTACACCG ACCGGATGCC CGGCCTCATG GCCTTCGTCG GCACCCGCCG CGAGGGCGAG
GCCGGCACCG TCGGCCTCCA CGACGCCCGC TTCCTGCCCC CGGCGGAGGT GGTGGGCACC
ATGGCCCGGG TCATGGTCTC CGGCTACCTC GCCGGCGCGC AGCTCCTCTC CGACGGCTGA
 
Protein sequence
MAALPLADLA ALREAWLSHL TAELTVARAV REEVHADPRL SGDEESTADL VADALEIPMQ 
RIAGTGRIGR IGPQTGPAVM LRAEMDALPI EEATGAPFAS TNGAMHACGH DVHMAALVAV
VRAARGLDLP VGLVPLLQPR EESAPHGGFD VVSSGLLDDH QVGVSVGAHV HADVPLGSVA
TGAGVVNAAA DSFRLSFEGA GGHGAYPHHG NDVMAATATT ALGLQDVVRK TVDPMHPVTL
TVGHLSAGPP ADNVLPETGL ILGTLRTVNA EDRQRVQDAV RLHATRTAEA FGVTCEVVHT
RGMPVLANDE ALVGFTDRWL LESGIRAAEP MRSMGADDFS FYTDRMPGLM AFVGTRREGE
AGTVGLHDAR FLPPAEVVGT MARVMVSGYL AGAQLLSDG