Gene Ksed_03910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03910 
Symbol 
ID8371901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp378707 
End bp379351 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content74% 
IMG OID644990687 
ProductZn-dependent hydrolase, glyoxylase 
Protein accessionYP_003148231 
Protein GI256824271 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0662663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCG CCGAGCTGTC AGCCGTGACC GTCCACCGCA CCAGCGTCTC CGAGATGGAC 
AACCGGTGCT ACGTCATCAC CTCCCGGGGC ACGGGGGCGC AGGTCCTCGT CGACGCCGCC
GCGGACGCGC CCGCCCTGCA GGGTCTGCTG GCCGAGGCCG CGGTGGGCGA GCCGGACCTG
CGCGCCATCG TCACCACCCA CCGCCACTGG GACCACGTGC GGGCCCTCGC GGAGCTGGCC
ACGGACGGGG TGGAGCTCCT CGGCGGCGAG GCCGACGCGG CCGCCATCGA GGAGGAGGCC
GGGCTCGCGG CCGGGAGCGT CCGCCCGCTC GAGCATGGCG AGGCCGTGCA GGTGGAGGAC
ATCGAGCTGC AGGTGATCTC GCTGCGCGGG CACACGCCCG GGTCGGTGGC GCTCGCCCTC
GTCGACGGCG GCGAGGTGCA CCTGTTCACC GGCGACTCGC TCTTCCCCGG CGGGGTGGGC
AAGACCTCGG GTCGGGCCGA CTTCGAGCAG CTCCTGGGGG ACGTCCGCTC GCAGTTGTTC
GACGCCTTCG ACGACGAGGC CCACGTGCAC CCCGGCCACG GCGACCCGAC CACGCTGGGC
CAGGAGCGCC CGCAGCTCGA CGAGTGGGCC GAGCGCGGGT GGTGA
 
Protein sequence
MLIAELSAVT VHRTSVSEMD NRCYVITSRG TGAQVLVDAA ADAPALQGLL AEAAVGEPDL 
RAIVTTHRHW DHVRALAELA TDGVELLGGE ADAAAIEEEA GLAAGSVRPL EHGEAVQVED
IELQVISLRG HTPGSVALAL VDGGEVHLFT GDSLFPGGVG KTSGRADFEQ LLGDVRSQLF
DAFDDEAHVH PGHGDPTTLG QERPQLDEWA ERGW