| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3376 |
|---|
| Symbol | |
|---|
| ID | 5337608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3603622 |
|---|
| End bp | 3605184 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001363104 |
|---|
| Protein GI | 152967320 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0759429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCG AGCTCGACGT CGTGAGCCCG TTCGGGCCCC TGGACGCCCT GGCGGAGACC
GCGCACCGCC TCTACCTCGA CGGGTACGGC GAACGCGCCA TCCAGGCCTG CCGCGAGGGC
CTGCACCTCT GCGAGCTCGC CGGCGACGAG CGCACCGCCC GCTACCTCCA GTTCGTCTGC
GGGGTCGCCC TCCACCAGCT CGGCCGCGCC GCCGAGGCCA GCGAGGAGGC CGGGCACCTG
CTGCGCCGCC TCGGCACCGG CGCCGAACCG GTCTGGCGGG CCAAGGCCCT CGCCCTGCTC
GCCGAGTCCC GCGTCGACCT CGGCATGACC GCCCTGGCCA TGGACCACCT CGCCGAGGGC
CAGCTCATCG TCACCGGCCA GCCCATCCGC ACCTACGACC ACCTCTCGGC GACCATGTCG
GTGGCGCTGG CGCTCAACGC CCTCGCCCTG TTCGAACCCG CCGACGAGCT CATGGTCCAG
ATGCTCGCCC TGACCTTCCC GCCCGCCCGG GTGCGGCTCA ACGTCGCCCA GGAGGCCGCC
GTCCTGCAGG TCTCCTGGGG CGCGATGCTC GAGGTCGCCG GCCGCGGGGC CGACGCCTGG
CCGCACTACG CCACCGCCCT GTCCCGGGCC GCCCTCATGC GGGCCCTGGC CCTGGAGGTC
GACTACCCCG AGATGCACGC CCGGGCCGAG GCCATCGAGG CGTTCGTCCT CATGCGCACC
GGCGACACCG CGCTGGCCGA GGGCCGGCTG CGACCGGCGA TGGCCGCGTT CCGGCTGCGC
GAGGAGCTCG CCGAGACCCA GATCGCCCGC ATCGCGCTGG CCATGGCCAG CTCCGACGCC
GGCCACCGCA CCGAGGCCGC CGACCTCCTC GCCGCCGTCC AGCGGGTGTC CTCCTCGACC
CAGCTCGACG TCTGGGGCCT CACCGCGCTC GCCGTCCGGG CCCGCAACGC CGTCCAGCAC
GACGGGCGCA ACGAGGCCGC CGACGCCCTC GAGCTCCTCG CCCAGATCTC GCTGTCGCGG
CTGTGGGAGG ACCGGGAGAG CCGCTTCGAG GCGCTGCAGG ACCGCATCCA GCAGCGCGAG
ATGGCCGAGC AGCACGAACG CATCGGCCGC GCCGCCCTCG TCGACCCCAT GACGGGCCTG
GGCAACCGGC GCCGGCTCCA GCAGGTCCTC GAACGCCCCG ACCAGCGCTT CAGCGCCGTC
CTGCTCGACG TCGACCGCTT CCGCGCCGTC AACGAGGAGC ACGGCCGGGA CACCGGCGAC
GCCGTCCTCC AGCGCATCGC CGACCTCCTG CAGCGCAACG TCTCCGACGA CGACGTCGTC
GTCCGCTACG GGGGCGACGA GTTCGTGGTG CTGGTGCCCG CGACGCGCGA GGCCACCGCG
ACGGCGGAAC GGTTGCTCGA GGTCGTCCGC AAGGAACCCT GGCTGGAGAT CTCCCTCGGC
CTGCGCGTCA CCGCCTCCGT CGGGCTCGCC GGGCCCGCCT CGGCCGCCGA GGCGCTCGCC
GCGGCCGACG CGGCGCGCGA GGCGGCCAAG CGCGCCGGGC GCGACCGCCT CGTCGTGGCC
TGA
|
|---|
| Protein sequence | MGSELDVVSP FGPLDALAET AHRLYLDGYG ERAIQACREG LHLCELAGDE RTARYLQFVC
GVALHQLGRA AEASEEAGHL LRRLGTGAEP VWRAKALALL AESRVDLGMT ALAMDHLAEG
QLIVTGQPIR TYDHLSATMS VALALNALAL FEPADELMVQ MLALTFPPAR VRLNVAQEAA
VLQVSWGAML EVAGRGADAW PHYATALSRA ALMRALALEV DYPEMHARAE AIEAFVLMRT
GDTALAEGRL RPAMAAFRLR EELAETQIAR IALAMASSDA GHRTEAADLL AAVQRVSSST
QLDVWGLTAL AVRARNAVQH DGRNEAADAL ELLAQISLSR LWEDRESRFE ALQDRIQQRE
MAEQHERIGR AALVDPMTGL GNRRRLQQVL ERPDQRFSAV LLDVDRFRAV NEEHGRDTGD
AVLQRIADLL QRNVSDDDVV VRYGGDEFVV LVPATREATA TAERLLEVVR KEPWLEISLG
LRVTASVGLA GPASAAEALA AADAAREAAK RAGRDRLVVA
|
|---|
| |