Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2376 |
Symbol | |
ID | 8381531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2539782 |
End bp | 2541854 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645005138 |
Product | acyl-CoA oxidase domain protein |
Protein accession | YP_003162313 |
Protein GI | 256833586 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0709206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCG TCTCGGACCG TCCAACCCGG GTCACCCCCG ACAACCCCAC CATCAACACC ACCTACCTCA GCGAACACCT CCTCGGACGG TGGGCTGACC TGAGAAAAAT CGCACGGACA CTTGCCCAAG ACGAACGGCT CATCCGTGAC CCCCACCTCG CCATGGACGA ACACCGCGAA CGCGTGTTAG CCCAACTGAA AATCCTGGTC ACCGAAGCGC AAGTGTTGCG CGCATTCCCC ACCCGACTCG GCGGCAAAGA CGACGCCGGC GGCGGGATCG CCGGGTTTGA AGAACTCGTC GCCGCGGACC CCTCCCTTCA AATCAAATCA GGGGTGCAAT GGGGGCTGTT CTGCGCGGCC ATCCACCACT TGGGAACCGA AGAACAACAA GACCGGCTCC TCCAAGACGC CATGGAACTC ACCGTTCCTG GCGCGTTCGC CATGACAGAA ATTGGGCACG GATCAGATGT CGCCTCCATC GCCACCACTG CAACGTTCGA CCCTGAACAC GGAGACTTCA TCCTCAACAC ACCCTTTAGG GCAGCGTGGA AAGACTACCT AGGAAACGCA GCACTCCACG GAACAGCCGC TGTTGTGTTC GCTCAACTCA TCACTCGCGG CGTCAACCAC GGCGTCCACG CGTTCTACGT CCCCATCCGT GAAGTCAACG ACGACGGCAC CGCAGGACCA TGCCTCCCCG GCATCCAATC AGAAGATGAC GGCCTCAAAG GTGGGCTTAA CGGAATCGAC AACGGCCGCC TCGCCTTCAC CAACGTGCGA GTCCCACGCG ACAACCTCCT CGCCCGCTAC GGCAGCGTCG ACGACAACGG CGACTACACC TCGCCCATTG ACAGCCCCGG ACGCCGCTTC TTCACCATGC TCGGCTCCCT CGTTCAAGGG CGTGTCTCCC TCGATGGTGC TGCGGGAGTC GCATCAAAAA TTGCGCTCAC CACAGCAATC ACCTACGGCA ACCAGCGACG CCAATTCACC GGTGCATCGG AACACGATGA AACAGTCCTC ATGGACTACC AAACCCACCA ACGCAGGCTC CTTCCCCTGC TCGCGGAGGT GTATGCCGGG CACTTCGCAC ACGACCGCCT CCTTGACCTG TTCCACGCAG TGTTCTCCGA AGAGGGAATG GACACCCCCG AAACCCGCGA AGACCTCGAA ACCATGGCCG CGGCCCTCAA ACCCACCTCC ACCTGGCGGG CGCTACACAC ACTGCAAACC GCACGTGAAG CATGTGGCGG TGCAGGTTTC ATGGCGGAAA ACCGCCTCGT AGGGTTACGC CAGGACCTCG ACATTTATGT CACCTTCGAA GGGGACAACA CCGTTTTGTT GCAACTGGTG GGTAAACGGC TCCTCACGGA CTACGCCAAA CAATTTCGTG ACATTGACGG AATTGGGATG GCCCGGTTCG TCGTGGAACG CGCCGCCGAC ACCGTGCTCT ACAAAACCCC CCTGAACCGC ACAGTGCAAT CCATCCGGGA CAGCGGGTTG CGCCGCCGTT CAGCCTCAGA GCTTCGTGAA GAAGAAACCC AACGTGAGCT CCTCACAGAC CGGGTCAACA CCATGGTGGA ACGGCTAGCC CAAGCGCTAC GACCTGCGTC AAAAATGCCG CAAGATCAAG CGGCTGCACT GTTTAACTCC CACCAAGCAG AACTCATTGA CGCAGCAAAA GCCCATGCTG ACCTCCTCCA ATGGGAAGCA TTCACCAAAG CGCTACTCGA CATCGACGAC GAAGACACAC GCACAGTTCT CACCTGGGTG CGTGACCTGT TCGGGTTGCA CACCATTGAA AAGAACCTCG CCTGGTATCT CATTCACGGG CGCATGTCCG CGCAACGTGC GGAAACAGTG ACCTCGTACA TTGACCGATT GTTGCTGCGC CTGCGCCCGC ACGCCCAAGA CCTCATTGAC TCTTTCGGGT TAGATGATGG GCTGGTTCGC GCTACGATCG CCACCGGTGT TGAGCAGCAA CGCCAGGACG AAGCACGCGC TTACTACCGC AAACAGCGTG CCTCAGGTGA CGCACCCATT GCCGAAAAAG CCATGAAAAA ATCGGCTCGC TGA
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Protein sequence | MTAVSDRPTR VTPDNPTINT TYLSEHLLGR WADLRKIART LAQDERLIRD PHLAMDEHRE RVLAQLKILV TEAQVLRAFP TRLGGKDDAG GGIAGFEELV AADPSLQIKS GVQWGLFCAA IHHLGTEEQQ DRLLQDAMEL TVPGAFAMTE IGHGSDVASI ATTATFDPEH GDFILNTPFR AAWKDYLGNA ALHGTAAVVF AQLITRGVNH GVHAFYVPIR EVNDDGTAGP CLPGIQSEDD GLKGGLNGID NGRLAFTNVR VPRDNLLARY GSVDDNGDYT SPIDSPGRRF FTMLGSLVQG RVSLDGAAGV ASKIALTTAI TYGNQRRQFT GASEHDETVL MDYQTHQRRL LPLLAEVYAG HFAHDRLLDL FHAVFSEEGM DTPETREDLE TMAAALKPTS TWRALHTLQT AREACGGAGF MAENRLVGLR QDLDIYVTFE GDNTVLLQLV GKRLLTDYAK QFRDIDGIGM ARFVVERAAD TVLYKTPLNR TVQSIRDSGL RRRSASELRE EETQRELLTD RVNTMVERLA QALRPASKMP QDQAAALFNS HQAELIDAAK AHADLLQWEA FTKALLDIDD EDTRTVLTWV RDLFGLHTIE KNLAWYLIHG RMSAQRAETV TSYIDRLLLR LRPHAQDLID SFGLDDGLVR ATIATGVEQQ RQDEARAYYR KQRASGDAPI AEKAMKKSAR
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