| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1808 |
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| Symbol | |
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| ID | 8380972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1977631 |
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| End bp | 1978929 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004562 |
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| Product | twitching motility protein |
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| Protein accession | YP_003161754 |
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| Protein GI | 256833027 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.96744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGGCT GCTTTCCCTG CACGGCTGCG ACGCTTACGT CCACGCTTGC TCATGGTGAT
CTCCTTATGT CAGCAATACC CACCTATTTT TCCATACCTG CGCCAGTCTG CGAAACGCAG
GGTCAGACGT CACAAGTGAC GCGAGACACC CTCCGTGCGG GTGCCGGGTG GAAAACAGTT
AAGTTCGCTG ACCAGAACGC CGATGTGTGT GTCGTGAGCC TCGAACAATC TGTGATTCCG
TTGTTACATG CCCTGGTGTC CACGGGTGGT TCTGACCTGC ACATTAAAGC TGGTTCAGTG
CCACGTGTCC GAGTGGACGG GCGGTTAAGG CGACTGCAGG TTCCCGATCT CACTGACGGT
GACACCGCAC GCATGCTCGA AGAAGTGTTA CCCGAACAAC TGCACCAAGA GTTCCTCACC
AACCACGAAA CAGACTTCGC CTACTACCTC CAGGGGGTGG GACGTTTCCG TGTGAACGCC
TACCGGGCCC GCGGCATGGT GGGTATTGTG TTTCGGCGGG TCGCAGAACA TGCCATGTCG
TTACATGAGC TGGGGTTGCC TGAAGTTGTT GGGGAACTTG CGTTGGAACC ACGCGGACTT
GTCCTGGTGA CAGGGCCCAC TGGGTCAGGG AAATCAACGA CGCTCGCATC GATGGTGGAC
CTGATCAACA CGCTCCGTGA AGTCAATATT GTCACTATTG AAGACCCAAT TGAGGTGCTG
CACAGTGACA AAAAGGCGAT CGTCTCACAA CGAGAAGTGC GGTTTGACAC TGCAGACTTC
AACAGCGCAT TACGCGCTGC GATGCGGCAA GACCCAGATG TTATTTTGGT GGGGGAGATG
CGTGACGCCG AGACAGTGCG TGCTGCCCTT CAAGCCGGTG AAACTGGGCA CCTCGTGCTG
TCCACCCTCC ACACAATCGA TGCAGAGGAA ACGGTCAACC GCATCGTCGA TTTCTTCCCC
TCACACGAAC AAATGCAGGT GCGGATGGCG CTTGCTCAGT CGTTGCGGGG GATCGTGTCC
CAGCGGTTGG TCCGCCGAGC TGATAACGAA GGCCGGCACG TTGTTGCAGA GGTCATGATC
AACACAGGCC GCACCGCTGA GGCAATCATT GCGCCGTCAA CGACAGCTTC GTTGACTGAC
CTCATCGCTG ATGGTGAGTA CTACAACATG CAAACCTTTG ACCAGCATCT TTTTGGTCTC
GTGCGCGATG GTGTGGTGCG TTACGAAGAC GCGTGCACTG TGGCAAGCAA CCCACAGGAT
CTCACCATTG AACTGCGTGG AGCCGGACTC ATCATGTAG
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| Protein sequence | MVGCFPCTAA TLTSTLAHGD LLMSAIPTYF SIPAPVCETQ GQTSQVTRDT LRAGAGWKTV
KFADQNADVC VVSLEQSVIP LLHALVSTGG SDLHIKAGSV PRVRVDGRLR RLQVPDLTDG
DTARMLEEVL PEQLHQEFLT NHETDFAYYL QGVGRFRVNA YRARGMVGIV FRRVAEHAMS
LHELGLPEVV GELALEPRGL VLVTGPTGSG KSTTLASMVD LINTLREVNI VTIEDPIEVL
HSDKKAIVSQ REVRFDTADF NSALRAAMRQ DPDVILVGEM RDAETVRAAL QAGETGHLVL
STLHTIDAEE TVNRIVDFFP SHEQMQVRMA LAQSLRGIVS QRLVRRADNE GRHVVAEVMI
NTGRTAEAII APSTTASLTD LIADGEYYNM QTFDQHLFGL VRDGVVRYED ACTVASNPQD
LTIELRGAGL IM
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