Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1686 |
Symbol | |
ID | 8381794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1819414 |
End bp | 1820154 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645004435 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003161635 |
Protein GI | 256832908 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.698509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0109367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACT CAAGTGGAGT CGGCGTACTC GACAAAGCCG CCGCAGTTTT AGGGGCCCTA GAAGCTGGAC CCGCAACCTT GGCGCAACTC GTTGCCGCCA CCCAACTCGC CCGCCCGACA GCGCATCGGC TGGCAGTTGC ACTCGAGCAT CACCGCCTGG TCACACGCGA CATGCAAGGG CGTTTCATCC TCGGGCCACG GCTCAACGAA CTCGCCACCG CAGCGGGCGA AGACCGCCTC CTGGCCGCCG CGAACCCCGT ACTTGCAGCC CTGCGCGACC ACACAGGAGA AAGCGCTCAA TTGTATCGCC GTCAAGGCGA TCAACGCATC TGTGTGGCCG CAGCAGAACG CCCAGTTGGG CTGCGCGACT CCATCCCTGT CGGCGCAACA CTCACCATGC AAGCAGGGTC AGCCGCCCAG ATTCTGCTCG CCTGGGAGGA ACCCGACCGT CTCCACCGAG GTTTACAAGG CGCAAAGTTT ACGGCCACAG TCCTCTCCGG GGTACGCCGC CGGGGCTGGG CTCAGTCAGT CTCCGAACGT GAAGTTGGGG TCGCATCCGT GTCCGCGCCG GTGCGCGGAC CATCAGGACG CATCGTTGCC GCCGTCTCCA TTTCAGGTCC TGTTGAGCGT CTCACCCGGC AACCGGGGCG GCTGCATGCT GGCTCCGTTG TCGCTGCTGC AAACCGGTTA ACCGAAGTTC TCCGGCGCGC ATCCGAGGAG TCCCGGGCAG CCTCACAGTA A
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Protein sequence | MDNSSGVGVL DKAAAVLGAL EAGPATLAQL VAATQLARPT AHRLAVALEH HRLVTRDMQG RFILGPRLNE LATAAGEDRL LAAANPVLAA LRDHTGESAQ LYRRQGDQRI CVAAAERPVG LRDSIPVGAT LTMQAGSAAQ ILLAWEEPDR LHRGLQGAKF TATVLSGVRR RGWAQSVSER EVGVASVSAP VRGPSGRIVA AVSISGPVER LTRQPGRLHA GSVVAAANRL TEVLRRASEE SRAASQ
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