Gene Jden_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1616 
Symbol 
ID8380785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1742188 
End bp1743129 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content56% 
IMG OID645004366 
Productprotein of unknown function DUF808 
Protein accessionYP_003161567 
Protein GI256832840 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCG GTTTTCTTGC TCTTCTTGAC GATATTGCTG TCCTCGCTCG TGCCGCTGCA 
TCGAGTTTGG ACGATCTGTC CGCTGCCGCG ATGAAAGCAT CAGCGAAGTC TGCTGGCGTC
GTCATTGACG ATGCGGCTGT CACCCCGCAG TATGTGCAAG GCGTTTCCCC AAAGCGTGAG
TTGCACGTGA TTAAACGCAT CACCTTGGGG TCATTGCGTA ACAAGTTCCT TATCATTTTG
CCGGCCGCGA TGATCTTCAC GACCTGGGCT CCATGGATTT TGCCGATCCT CCTCATTGTG
GGCGGCGCCT ACCTCACGTT TGAGGGCGCG GAGAAGGTGT TGGGGTGGTT TGGGGTTCAT
CTCCATGGGG AAAAGGAAAC TTTGACCACG AGTGAGAACC CGGATGAGTT TGAGAACACC
TTGGTGCGTG GTGCTGTCCG CACTGACCTC ATTTTATCCA CGGAGATCAT GCTCATCACG
TTAAGCAACG TCGATGTGGA TGGGTTTGTG GACCGCCTCA TTGTCTTAAT CATCGTGGCA
CTTGTGATGA CAGCTGTTGT GTATGGTGCG GTCGCTGTGT TGGTCAAAAT GGATGACATT
GGGCTTGTGT TGGCACGTTC CCGTGCAGAT GCAGTGGGTG CAGTGGGCCG CGGTTTGGTG
GCGGTGATGC CCAAGGTATT TACCGCACTC AGCATCATTG GAACGGTCGC CATGCTGTGG
GTGGGTGGCC ACATTTTGAC AGCGTCGATG TCTGACCTTG GGTTCTCCCT GTTTTACGAC
ATCGCGCACG ATGTTGCGCA CGCGGTGGAA CCGTGGGGCG GAGCAGTGGG TGCGTGGGTT
GCCGACACCC TCTACTCTGC CGTGTTCGGG GTTCTTGTCG GTCTCCTTAT TGTGGCTGTC
GTGGCAGGGG TTGGGAAGCT CCGTCACCGC GAGGTGCACT GA
 
Protein sequence
MASGFLALLD DIAVLARAAA SSLDDLSAAA MKASAKSAGV VIDDAAVTPQ YVQGVSPKRE 
LHVIKRITLG SLRNKFLIIL PAAMIFTTWA PWILPILLIV GGAYLTFEGA EKVLGWFGVH
LHGEKETLTT SENPDEFENT LVRGAVRTDL ILSTEIMLIT LSNVDVDGFV DRLIVLIIVA
LVMTAVVYGA VAVLVKMDDI GLVLARSRAD AVGAVGRGLV AVMPKVFTAL SIIGTVAMLW
VGGHILTASM SDLGFSLFYD IAHDVAHAVE PWGGAVGAWV ADTLYSAVFG VLVGLLIVAV
VAGVGKLRHR EVH