Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0817 |
Symbol | |
ID | 8380000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 877911 |
End bp | 878858 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645003558 |
Product | ribonuclease BN |
Protein accession | YP_003160782 |
Protein GI | 256832055 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAACAA CAGCTGACTC ATCGTCAAAA AAGCCTCTTG ACCGTTGGAA AGATCGGGCG CGCTCGTTTA TTGCTTGGGT TAAGGAAACG CGTGCTGTTC GTGCCGTGCG GCGTTACCAG TTGGCAAATG GGTCCATTCT TGCTGGTGGT ATCACCTACA CGGCGCTTTT TTCTTTGTCC GCTGCCCTCA CCATCGGTGT GACGCTCCTG ATGAGGGTTT TTGGAAACAA CGAACAGTTG CGTGACCAAA TATTCGAGTC GCTTGATCAG TCTGTGCCCG GGCTCATTAA TACTGGTGAC AACGGGGGGC TTGTGCGCCC TGAGGACCTG ACAGTGTCTC CCACTGTGAC GTTGACAAGT GCGATCGCGG TGGGTGTGTT GTTGTTCACG GCGCTTCGTG TGATGGCCGC GTTTCGTAAG TCGTTGCACG CCATGTTTGG GATGGTGACT GCCCGAAAGA ACAAGCCCAT TGATAAGCTC CGCGAGCTCA TTGGTTTTGC GGTAATCGCG GTGGGTGTGT TTGTGTCAGC GGTGGCCACG ATCGCGGTGA GTGCAGTGGG CCGCTGGATG TCTGGTCAAC TTGTTGGCGG TGAACTGTGG TCGGCGTTGA TTCCGGTAGG AAGTATCCTC GTGGGGGTTC TTGTGGACGC AGGGATGTTT GTCTTGCTGA TGCGGGTCCT TGCCGGGTTG AAGATGCCAC GCAAAGACCT CTTTGCTGGA GCTGCTGTTG CCGCAGCAGG GCTGGGGTTG TTACGGGTGC TTGGGACTTC TGTTGTGGCA GGATCAGCCA CCTCAAATCC GTTGTTTGCG TCCGCAACAG TCATCATCAC GATTCTGGTG TGGATCAACA CGTCAGCGCG CATTATTTTG ATCGCGGCTG CGTTTGCCGC TGATCCACCG CACGCCATAT TGACTCGGGA AGAGGAGATG TCAGCGATGT CAGTGTGA
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Protein sequence | MKTTADSSSK KPLDRWKDRA RSFIAWVKET RAVRAVRRYQ LANGSILAGG ITYTALFSLS AALTIGVTLL MRVFGNNEQL RDQIFESLDQ SVPGLINTGD NGGLVRPEDL TVSPTVTLTS AIAVGVLLFT ALRVMAAFRK SLHAMFGMVT ARKNKPIDKL RELIGFAVIA VGVFVSAVAT IAVSAVGRWM SGQLVGGELW SALIPVGSIL VGVLVDAGMF VLLMRVLAGL KMPRKDLFAG AAVAAAGLGL LRVLGTSVVA GSATSNPLFA SATVIITILV WINTSARIIL IAAAFAADPP HAILTREEEM SAMSV
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