| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0711 |
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| Symbol | |
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| ID | 8379896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 767420 |
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| End bp | 770599 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003452 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003160678 |
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| Protein GI | 256831951 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGTGG ACACTCCCCT TGACCCTTCG CAGCGCGCAT TTCTTGACGC CTACGAGAAC
ACCAACAACA ATCTCGTTCT CGTTGGAGCA CCAGGCAGCG GGAAAACACA CACCATGGTT
GAACTTGTCC GACACGCAGT GCACCGTGGT GTTTCCACAG AGCGAGTACT TGTCCTCGCT
GCCACCCGTC ACCTCGCGTC AGTGCTGCGT ACTCGAATCA CACAAGTGAT CGATGTGCCT
GTCCGCGGAG CTATCGCCCG AACAGCACCA GCCCTTGCCT ATTCTCTCCT GTCAGCACAC
GCGGCTGCGC AATCACAACC GTTACCACGG CTGATTACTG GACCAGAACA AGACCACCTT
TTAGCACAGA TTCTCGCCGG TCACGCCCAA GGGCTTGTCC CGGCTCCAGC GTGGCCTCCC
AGTGTTCCCC CTCAGACGTT GTCACTGCGC GGGTTTCGTG ACGAACTGCG TGACCTGTTT
ATGCGGGTCG CTGAGCATGG CTTGACCTCT GGCGAGCTCT TCGAATTAGG TCAACGCCAT
GAGCGGCCGG ATTGGTGTGC GGCAGCACAG GTGCTCGCGG AATATGACAC CGTTGTGGAG
TTGTCGAGTA TGCAACCAGA CGTAGGTCGG CGTGACGACC CCGCACGAAT TGTGTCTTCA
GCTGCGGACA TCCTGTCACA CTGGGACACC GGTGGGCGTC CCACCTATGA TCTTGTCATC
GTTGACGATG CCCAAGAAAT GACTGCTGCA ACAGTGGCTC TTCTCCAGGT ACTTCACCGT
GATGGGGCCA GAATAGTGAT GGCAGGGGAC CCGGATATGA CCGTCCAAGG TTTTCGTGGT
GCCTCTCCTC GCCACCTCAA CCAAGCGACG TTCCCGCGCA CTGCCCCAGG TGGATTTGCC
GCTGAGCGCT TGACCCTCTC CACTGTATGG CGTAGCCATC CCGCAGTACG CGAACGGGTC
CGCGAGGTGA CCTCAGCCAT CGCATCGGCA GGAATTGTAG CTCACCGGCG CGCCACCTCA
CGACACGTTA ACCGTGCACA GGACCCCCAA GCCTCACCGC CCGATGAGAA ACCAACCACC
GTTTCGCGGA CTCAGCCCGG TGTTGAAGCA CACCTTGCCC CCAGCATTCA CGTTGAAACA
AGTGCGATCG TCAACACACT TCGACACTGG CACATTGATG AAGCCATCGC ATGGTCGTCC
ATGGCCGTGA TAGCCCGGTC GACTGCTCAT CTCCAGAGGA TTCGCCGAGC CCTCGAACGA
GCCCAGGTTC CCGTCACTGT CCTGGGAACA GACGTTGCTT TGCGTGATGA ACCCGCGGTC
CGTGGACTCT TGGATGTTCT TGCACTGGCC CGAGACGACA CCATCGACCT CGACCTTGTC
CTGCGAGTCC TTCAAGGAGT GTACGGGGGG TTGGATTCGC TCGGTATCCG TCAATTGCGC
CGCCATCTAC GGTCCGCAGA ACTTCGTCAA GACGGCGCAC GGACCTCCGA TGAACTTCTC
ATTGACCTTA TGGCAACTAT CCGTGATCAC GGACACCATG ACATTCCTCC GCACCACGTT
GCAGCGGCAG CAATTGGTCG TCTCACGGCG ATGATCCAAG CAGCCTGCAC TGTGATGCAG
GGCCACACAC ACGATGCGCA AACAGCACTG TGGGCGGTGT GGGACGCGGC CCAAGTGGCC
CCCACATGGC GGCACATCGC TCTGTCGGAC TCCCCGGCAT CGGGGCGCGC ACATGATGAC
CTTGACGCAG TGATGGCACT CTTCCGGTCG GCGGAAACTC ATGTGGACCG CATGCCAGAC
CCGTCCGTCG AGTCATTTAT TGCGTTTATC GAAGCGCAGG ACCTTCCTGC CGATTCATTG
GCAATTCGCA ACCAATCAGA CCACGTCGTC TCCCTGCTCA CCCCGCAAGC AGCAGCTGGC
CGACAATGGC AACGAGTGAT CATCACTGCA CTCCAAGACG GAATCTGGCC AAACCTCACA
CTGCGAGACT CCCTGTTAGG GTCGCTTCAC CTGGTCGACA TTCTCACTGG CCGGGCAAGT
GAAGACGGCG GTCCCCGCGA TTCAGCTGCT CGTACTGACA TCCTTCACGA CGAGTTGCGG
TCATTTGCTC TGTCCCTGTC GCGTGCACAA GAACACGTCA TGCTGACGGC AGTTGATGAC
GATGAACAAT CCCCATCCCC GTTCCTTCAC CTGGCAGCAC CACAACCGCG TCCTATCACG
CTGGGAGACG AATCAGGTCC CCTCGACATG AGATCGGTGA CAACCGCGGC TCGAGCTGCG
CTCCATCAAG CGCTCCTGCG TGAGGACGCC GAGCAAGCCC ACCAACTGGC ATCTCTCTTG
GCCGCAATGG AACCCCACAC TCCCGCTTCT GACCCACACA CGTGGTACCA AGCACATCCA
GTCAGCACAA CACTCCCGCT GTTCCACGAG CTCACGACTC TTCCGTTGTC CCCCTCTCGC
GTCGACGTCG CTCAGACATG CTCACTGCGC TGGGCGCTCG AAACATCAGG AGGCCAACCA
GCCTCAGGGC TCTCCCAAAG CGTGGGCACA CTCATCCACG ACGTCGCTGC ACATGCGCCA
ATGGGGACGA TCACGCAGTT CACACAACTC CTTGACGAAC GCTGGGACCA ACTGAACTTA
CCTCCCGGTT GGCCCGCCCA ACGACTTCGA AGCCAAGCAC AAACCATGGT AGGTAAACTC
GCGCAATACA CCTCCATGGT CCGTGATGAC GTCGTTGAGG TTCTTGTCGA ACACCCCTTC
ACCGTCGAGA TCGCTGGTGC ACGGATCAGT GGCAGCATTG ACCGGGTTGA AATCCTCCGC
TCAGGAGACG CACGAATTGT TGACCTCAAA ACCGGGCGTA CTGCACCTAC ACAAGCTGAC
ACCCAGGTCA ATCCGCAACT AGGGATCTAT CAACTTGCGG TCCTCCATGG TGCAGTGCCA
GGCGTCGAGC ACACGCACGG TGCCGACCTG CTGTACATAG CTACCCCCAC CAAGAAACCC
ACAACACGCC ACCAACCACC GCTGACAGAG CCTGACAACA ACTGGGTGAC AACGCTCATT
GAGGACACCG TGACGACCAT GCGTTCCGCA TCAATGACTG CGCACCGTAA CCGGCTCTGT
GATCAGTGTC CGGTACGCAC TAGTTGTCCG CTGCACACTG ACGGGAGGCA CCTGTCATGA
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| Protein sequence | MGVDTPLDPS QRAFLDAYEN TNNNLVLVGA PGSGKTHTMV ELVRHAVHRG VSTERVLVLA
ATRHLASVLR TRITQVIDVP VRGAIARTAP ALAYSLLSAH AAAQSQPLPR LITGPEQDHL
LAQILAGHAQ GLVPAPAWPP SVPPQTLSLR GFRDELRDLF MRVAEHGLTS GELFELGQRH
ERPDWCAAAQ VLAEYDTVVE LSSMQPDVGR RDDPARIVSS AADILSHWDT GGRPTYDLVI
VDDAQEMTAA TVALLQVLHR DGARIVMAGD PDMTVQGFRG ASPRHLNQAT FPRTAPGGFA
AERLTLSTVW RSHPAVRERV REVTSAIASA GIVAHRRATS RHVNRAQDPQ ASPPDEKPTT
VSRTQPGVEA HLAPSIHVET SAIVNTLRHW HIDEAIAWSS MAVIARSTAH LQRIRRALER
AQVPVTVLGT DVALRDEPAV RGLLDVLALA RDDTIDLDLV LRVLQGVYGG LDSLGIRQLR
RHLRSAELRQ DGARTSDELL IDLMATIRDH GHHDIPPHHV AAAAIGRLTA MIQAACTVMQ
GHTHDAQTAL WAVWDAAQVA PTWRHIALSD SPASGRAHDD LDAVMALFRS AETHVDRMPD
PSVESFIAFI EAQDLPADSL AIRNQSDHVV SLLTPQAAAG RQWQRVIITA LQDGIWPNLT
LRDSLLGSLH LVDILTGRAS EDGGPRDSAA RTDILHDELR SFALSLSRAQ EHVMLTAVDD
DEQSPSPFLH LAAPQPRPIT LGDESGPLDM RSVTTAARAA LHQALLREDA EQAHQLASLL
AAMEPHTPAS DPHTWYQAHP VSTTLPLFHE LTTLPLSPSR VDVAQTCSLR WALETSGGQP
ASGLSQSVGT LIHDVAAHAP MGTITQFTQL LDERWDQLNL PPGWPAQRLR SQAQTMVGKL
AQYTSMVRDD VVEVLVEHPF TVEIAGARIS GSIDRVEILR SGDARIVDLK TGRTAPTQAD
TQVNPQLGIY QLAVLHGAVP GVEHTHGADL LYIATPTKKP TTRHQPPLTE PDNNWVTTLI
EDTVTTMRSA SMTAHRNRLC DQCPVRTSCP LHTDGRHLS
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