Gene Jden_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0645 
Symbol 
ID8379830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp686330 
End bp687265 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content60% 
IMG OID645003382 
Producthypothetical protein 
Protein accessionYP_003160612 
Protein GI256831885 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.214071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.230839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAACTT CTTCACGTGA TAGCGAACCG GTGACCCTGC GTGCATTTGT CCGGCAAGCC 
TGTGCGCCCA GGTATCTTGC GCTCTTGGTC GTGTTCCTTG CTGTGGCGGC GCTCTGCGCC
CGCTTGGGCG TGTGGCAGTT GGATCGTGCG TTTGAGCGCG CTGAGTTAAG CAGGGTTCAG
GAACAAGCTG AGGCGGAGGC TGAGCAGCCA CCGTTTCTCG GCGAAGTCCT CACCCCGCAA
ACAACGTTTC CTGGCAACTT GGTGGGCCAG CGTGCGGTGG TGACCGGTGA GTTTGTGCCT
GAGACTACGC GTGTGGTGTC AGGGCGCACC ATTGGCCAGG GCGAGGGTGT GTTACTCGTC
GATGCGCTGC GTGTGACTGA TGATGGTTCC GCTGGAGCGT CGTGGGCCCA CTTGTCACAG
CCACCTTTCC TGGCTGTTGT TCGAGGGTGG TTGCCCAAGG ATGCTGTCGG GGATGACGGG
TGGCTCACTG ACCAGTGGGC TGATGTGGTG GTTCCACCAG CAGGGGAGGT CACCGTCGAA
GGGTGGTTGC AAGCAAGTGA GTCAACTTTG CCTTCAGATT CGGCTGGTGT TGTGGTCTCG
TCGCTGTCGA CTGCCGCTCT CGCTAACGCG TGGGATGCCC CGGGTTACGG CGGGTATCTG
GTCGTGATTG ACAGTGATCC GGAGCAGTCT GATGCTCTGA CATTGTTGCC CCGACCCACG
ATTGAGGGGG GTGACGGTGT GAACGTGCAG AACTTCTTCT ATGCGTTGCA GTGGTGGGTG
TTTGGACTGT TTGCCGTTGC GTTGTGGTCA CGCCTGGTTG TTGATGCGGT GAAGGACCAG
GCGGTGTCGG TGTCCCAGAA CCCGTTTGCC CAGTTGAACG CGCAAGCCCA CGACACAGGG
GTCGGCATTG ACAACAATGC ACCACCACGC ACATGA
 
Protein sequence
MATSSRDSEP VTLRAFVRQA CAPRYLALLV VFLAVAALCA RLGVWQLDRA FERAELSRVQ 
EQAEAEAEQP PFLGEVLTPQ TTFPGNLVGQ RAVVTGEFVP ETTRVVSGRT IGQGEGVLLV
DALRVTDDGS AGASWAHLSQ PPFLAVVRGW LPKDAVGDDG WLTDQWADVV VPPAGEVTVE
GWLQASESTL PSDSAGVVVS SLSTAALANA WDAPGYGGYL VVIDSDPEQS DALTLLPRPT
IEGGDGVNVQ NFFYALQWWV FGLFAVALWS RLVVDAVKDQ AVSVSQNPFA QLNAQAHDTG
VGIDNNAPPR T