| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0614 |
|---|
| Symbol | |
|---|
| ID | 8379799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 654473 |
|---|
| End bp | 655018 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645003351 |
|---|
| Product | ribosomal protein L17 |
|---|
| Protein accession | YP_003160581 |
|---|
| Protein GI | 256831854 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0203] Ribosomal protein L17 |
|---|
| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACCC CGTCTAAGGG CCCACGGCTC GGCGGCAGCC CGGCTCACGA GCGTTTGATG
CTCGCGAACC TCGCTTCTAG CCTTTTCGAG CACGGCCGTA TTACGACCAC CGTGACAAAG
GCCAAGCGTC TTCAGCCGGT GGCCGACCGC CTCATCACGA AGGCCAAGCG TGGTGACCTC
CACGCACGCC GTCAGGTTGC TCAGGTGATT CGCAACAAGA CCGTTCACGT CCCAGACGCT
GAAGGTGACG CGAAGACTGT TGTGCACCGT CTCTTCACGG AGATTGCACC GGCAATGGCA
GAGCGCCAGG GTGGTTACAC TCGAATCACC AAGATCGGTA CTCGTCGTGG CGACAACGCG
CCGATGGCTG TCATCGAGCT CATCACTGAG CCGGTTTCCC CGAAGCAGGC TGTTGTGAAA
GAGGCAACGA AGGCCGCTGA GCGTGCCGCT GCTAAGGAAG AAGCAGCAGC TCAGGTGGAG
GAGTCTGTTG ACACTCCTGC TACTGAAGCT GATGCTCCTG CCGCTGAGGT TGAAGAAGCA
AAGTGA
|
|---|
| Protein sequence | MPTPSKGPRL GGSPAHERLM LANLASSLFE HGRITTTVTK AKRLQPVADR LITKAKRGDL
HARRQVAQVI RNKTVHVPDA EGDAKTVVHR LFTEIAPAMA ERQGGYTRIT KIGTRRGDNA
PMAVIELITE PVSPKQAVVK EATKAAERAA AKEEAAAQVE ESVDTPATEA DAPAAEVEEA
K
|
|---|
| |