| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0362 |
|---|
| Symbol | |
|---|
| ID | 8379552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 382479 |
|---|
| End bp | 383492 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645003096 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003160334 |
|---|
| Protein GI | 256831607 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGCC GCCCACGCAC CGCAGTCACC CTCGCCGACG TCGCCGAAGT CGCGGGTGTG
TCCAAAGCAG CCGTGTCCGG TGTCCTCAAC GGCAAACCAC GTGTCGCCCC CAGCACCGCT
CAACGCATCC TTGACGCAGC ACGCACACTG GGATACCACG CCAACCCCAC CGCCCAACAA
CTACGATCCG GACGCACCAA CGCCATCGGG TTCGTCATCC CCGAACTCAA CCGCCCCTAC
TTCGGGGAAC TTGCCACCCA CCTCGCCAAC CAGCTCGACG CCCAAGGCCA ACACCTTGTC
ATCCAGCGCT CCGGCGGATC CAAAGAACAC GAACTCGCAG CCGCCCAATT CGCCCAACTA
CGCCGCTACG ACGCTGTGAT CCTGTCCGTC CTCGGAGTTG ACCCACCCGA CCTGGAATCT
CTGGGATTTT CCATCCCGCT CATCCTCCTG GGTGAGAAAT CCATGCCCGG CGCCCACCCT
CAAGTCATCA TGGACAACGA AGCTGGGGCC CACAACGCTG TCACCCACCT CCTCACGCAC
GGGGCAACCC GCATTGTCAT GCTCGGTGGT TCCCACTCCC CCGACCGCAA CGACATGACC
CGGCGACGCA CCGACGGGTA TCGCAGCGCC CACTGCGACA CCAACCACCC CCTCAACGAG
GAACTCATCG TCGAACTAAC CGGTGTTGGT CCTGAAGCCG GATACCACGC GATCACCACC
CTCATCGACG CCGGCACACC CTTCGACGCT GTTTTTGCTG TCACCGACGT CGTCGCCATC
GGAGCCATGC GAGCACTAGC GGACGCAGGC TTCACCATCC CCGGGGACGT CCAAGTCATC
GGCTTCGACG ACATCACCGA CGGGTGCTAC ACCATCCCAC GCCTTAGCTC AGTGAACCCA
CACAAAGAAC GCATCGCACA AGCCGTCCTC GACCTCATTG CCGAGCCCGA GACCGCCCCC
CAAGCAGTCA CAATCCCCAC AACCCTCACA CTGCGAGAAT CAACGCAGCG TTAA
|
|---|
| Protein sequence | MNRRPRTAVT LADVAEVAGV SKAAVSGVLN GKPRVAPSTA QRILDAARTL GYHANPTAQQ
LRSGRTNAIG FVIPELNRPY FGELATHLAN QLDAQGQHLV IQRSGGSKEH ELAAAQFAQL
RRYDAVILSV LGVDPPDLES LGFSIPLILL GEKSMPGAHP QVIMDNEAGA HNAVTHLLTH
GATRIVMLGG SHSPDRNDMT RRRTDGYRSA HCDTNHPLNE ELIVELTGVG PEAGYHAITT
LIDAGTPFDA VFAVTDVVAI GAMRALADAG FTIPGDVQVI GFDDITDGCY TIPRLSSVNP
HKERIAQAVL DLIAEPETAP QAVTIPTTLT LRESTQR
|
|---|
| |