Gene Jden_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0288 
Symbol 
ID8379482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp309943 
End bp310884 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content60% 
IMG OID645003023 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003160264 
Protein GI256831537 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.817819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0965437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGG GGGTGGGTAT GAAAACATGG ACTTATTCCG CTTTTGGTGG ACCTGACAAC 
CTTGAACTCA CTCACCAAGA CCTTCCTGAA CCAGGGCCGG GGACGGTCCG TATCAAAGTG
CGTGCGGCTG CCGTGAACCC GGTGGACTGG AAAATCATGG CCGGAGGGCT TTCCGACGTT
CTCCCAGTAC TGTTCCCCGC CACGATCGGG TGGGACGTAG CCGGTGTGGT GGACGCTGTG
GGGTATGGCG TCCAGGAGTT CGCGGTGGGT GATGAAATCC TCGCTGACAA CATGCAAGAC
TTTGTGTCCC GTGGCTCCAT GGCCGAATAC ACGATCGTGC CGGTTCGGGT AGCAGCGAAA
AAACCGCAGG CGTTGAGTTT TGTTGAGGCT GCGTCATTGC CGCTGGCAGG GCAAACCGCC
CTTCAAGGTG TTGACCACCT TGGGTTGTCT AAGGGGGACA CCCTCCTCAT CCACAACGCG
TCAGGTGGGG TAGGTCGTGT TGCGGTTCAA TACGCCGTCC ACCAGGGTAT TCGTGTCATT
GGTTCAGCCT CTGAGTCGAA CCATGACGCG TTGCGCGCCA TGGGCGCTGA GCCTGTGTCC
TACGGTGACG GGCTTGCTGA TGCGGTCCGC GCGTTGGCGC CGGACGGCGT CGATGGGGTG
TATGACGCAG TAGGAGGGGT CACCGACGTG TCAGCTGCCC TCATGGCAAC AGGCGCATCA
ATCATCTCGA TCGCAGACCC CAGCGTCATC GCGCTGGGCG GAACCTGGCT GTGGGTCAAC
CCGAACTCCG CTGACACGGC ACGACTGGCG GACCTGGCAG CACAAGGCAT CATCACCCCG
CACATCGACA AGATCTTTTC CTTTGACCAA GTGCCAGCCG CCTACCAACA CAACATGGAC
GGGCACACGC GCGGGAAAGT CGTAGTCGAC GTCACAGCAT AG
 
Protein sequence
MRLGVGMKTW TYSAFGGPDN LELTHQDLPE PGPGTVRIKV RAAAVNPVDW KIMAGGLSDV 
LPVLFPATIG WDVAGVVDAV GYGVQEFAVG DEILADNMQD FVSRGSMAEY TIVPVRVAAK
KPQALSFVEA ASLPLAGQTA LQGVDHLGLS KGDTLLIHNA SGGVGRVAVQ YAVHQGIRVI
GSASESNHDA LRAMGAEPVS YGDGLADAVR ALAPDGVDGV YDAVGGVTDV SAALMATGAS
IISIADPSVI ALGGTWLWVN PNSADTARLA DLAAQGIITP HIDKIFSFDQ VPAAYQHNMD
GHTRGKVVVD VTA