Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4206 |
Symbol | |
ID | 3936695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 4310382 |
End bp | 4312220 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637906592 |
Product | flagellar hook-length control protein |
Protein accession | YP_512148 |
Protein GI | 89056697 |
COG category | [N] Cell motility |
COG ID | [COG3144] Flagellar hook-length control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGATC TGTTCCAGAA CCTCGGCACC CCGGGGCGGG GCACACACTC TCGCAACCGG CCGGGTACGG AGATGAATGT CGCGCAAGGT GCGGCGTTCG GAGCCGCCTT CGAATCTCTG CCGGCAGACG AGGACGAGTG GACGATCCTC GACAGGCACA GCGGCCTTGC AGCGGACGTG CACGTCGGTA AGCGATTGGG AACGGCGCAG GGGCAGGATC CCCTTCGAGA TCAACCGCCG ATCGCACCAA ATGAAGGCGA TGTCACCGAC GCCATGTTCA CGACTCAGCC GGGAATAGTA AACACGACGC CTCTAATTGG CGGCCAGCCA GAAGACCCGT CGGTTTCAAA CATGGTGATT GCGGCGCAAC TTACGACTGT TGAAGCGGGC GGTGTCGCGG ACATTTCTGA CCAACGGGCA AGTGTTGGGC TGGTAATCAC TCCAGGCCAT GCGACCGTCG GCATGGGTCC TTTGGGTCAG ACCAGCCGGT TGGCGATGCC CGTGATCGAA CGGAACGCAG GTGATCCGTC CGCCCTTCCA ACTGCCACGC ATAACGAAAC CCGATATACG TCTACACCGT CGGGGCCAGG GGCCGTTCCG GTGGAGCGCA TTGGCACATT GGCCTCGCCA CCGACGATCA CGTCGGTCGA GGGCAAAACA GCGCAAACCA CACCGCTGAC TGTCCCGTCG TCCGACGGCG TGACAATTCC CCTATCGCTG CGGGGGACCG AAAATACGCC GCGCCCCACA TCGGCGCTTG CGGCGCGGAC GGGCTCTCAA GACCAGATGA GCATTTTGCC GGCGTCGAAC TCCTTCGCGC CACAGCCAAC CGGCAGTAAT GGTACCAATG CCATCGGAAC CCCCGATCAA CGAGCTGCGC CAGCACTTGC GCCGACCGCT CGCGACACTC TCCCAAAAAT CGGTGGGGCG GAGCAAGCAT CCACGCAGAC TCCTCTGCTA ACCGATGCAA AGGGGATGCC GCACTCACCG CTCACCGCAC AAATGCGAGA AGCCAACCCA CCGAGTGACG CACGCTCGAC AGATGCACTC ACACCGCCGC GCACAACGGT TCCGCAACCA CCTCAGTCAA GCCCACCCGG TAGCTTGGTT TCCGCAGCGT CCATGTCGGC TAGCGGTGAC CCGGACCCCG AGTCGATCTT CGATAAGAAC CACGCAGAAT TGCCCCGATC CGGCGACTCT GCGCCTGCAC GCACGGGCAG CTGGGCCATC ACGCCTGCCA CCGCAGCCGC ACCGGTGATC TCCGCTCCCA TGCAGTCCAT TCTCAGCCCG ATGTCGGGCC TATCGACGAT GCCTATGCAT CCAGATATCA GCGCAGACCC TTTGGCAGAC CTCGACTTTT CCGTTCAAAG CTTGTCTGCA ACCTCCACGA CAGCCGCGCC GCCGTCCGCG TCCATCTTTG CACAAGCCTC CTCCGCCACC GCCCAAGTGG TCGCGCAGCA AGTTGCTGCG GCGTTGTCGA AAGGCAATCC TGCCTCGGAC GCCCCGTTGG AACTTGCGCT GGACCCGCCG GAACTTGGGC GGTTGCGCAT GCAAATTACG GAAATCGCAG GTGTCATGAC CCTCATGATT CAGGCCGAAC GGCCAGAAAC AGCGGATTTG GTGCGTCGAC ATCTGGAACT TTTGGCGCGG GAATTCGCGC AGGAAGGCCT GGATGCTCCA TCGGTCCACG TCTCGCAAGA AGGGGCCGGT GACGGTCGAC AGCACTTGCC GGGTGACAGC GCCGATGCAG CCGCCCCCTC AACCGTTGAT GACCCAACCG ATGCCTCACC GCCCGAAATA GGCCGCGCTG CACGCAGCGG ACTAGACCTC AGATTATAG
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Protein sequence | MDDLFQNLGT PGRGTHSRNR PGTEMNVAQG AAFGAAFESL PADEDEWTIL DRHSGLAADV HVGKRLGTAQ GQDPLRDQPP IAPNEGDVTD AMFTTQPGIV NTTPLIGGQP EDPSVSNMVI AAQLTTVEAG GVADISDQRA SVGLVITPGH ATVGMGPLGQ TSRLAMPVIE RNAGDPSALP TATHNETRYT STPSGPGAVP VERIGTLASP PTITSVEGKT AQTTPLTVPS SDGVTIPLSL RGTENTPRPT SALAARTGSQ DQMSILPASN SFAPQPTGSN GTNAIGTPDQ RAAPALAPTA RDTLPKIGGA EQASTQTPLL TDAKGMPHSP LTAQMREANP PSDARSTDAL TPPRTTVPQP PQSSPPGSLV SAASMSASGD PDPESIFDKN HAELPRSGDS APARTGSWAI TPATAAAPVI SAPMQSILSP MSGLSTMPMH PDISADPLAD LDFSVQSLSA TSTTAAPPSA SIFAQASSAT AQVVAQQVAA ALSKGNPASD APLELALDPP ELGRLRMQIT EIAGVMTLMI QAERPETADL VRRHLELLAR EFAQEGLDAP SVHVSQEGAG DGRQHLPGDS ADAAAPSTVD DPTDASPPEI GRAARSGLDL RL
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