Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3939 |
Symbol | |
ID | 3936420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4037402 |
End bp | 4038973 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637906317 |
Product | propionate CoA-transferase |
Protein accession | YP_511881 |
Protein GI | 89056430 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.438749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGA TCGTCACCGG CGCAGAGGCC GCTGGACAGA TCAAGGACTG CGCGGTTGTG ACCGTATCCT CCAGCAGCGC GTTGGGCTGC CCGGATGCCG TGCTGCAGGC CATCGGCGCG CGGTTCGATG CCGAGGGGCA CCCGCAAAAC CTGACCACGA TCCACCCCAT CGCGGCAGGC GACATGTATG GTGTGAAGGG TGTGGACCAC ATCGCCAAGG ACGGCCTTTT GTCGCGGATC ATCGGTGGCT CCTACCCGTC CGGCCCGTCG TCCCTGCCGA TGCCTGAGAT TTGGCAAATG GTCGTGGAGG ACCGCGTCGC GGCCTACAAC GTGCCCTCCG GCATCCTCTA TGACATGCAC CGCGATGTGG CCGCGCGCCG CCCCGGCGTC TTGACGCAGG TGGGGTTGGA GACGTTTGTG GACCCAATCC GCGAAGGGTG CGCGATGAAC GCCTCCGCCG ACGCCGCGCC CATTGTGTCC CGCGTGGAAT TCGCCGGTGA TACCTGGCTG CACTTCCCCA ACATCGTGCC GGACGTGGCC ATCATTCGCG CCACCACGGC GGATGAAAAC GGCAACCTGA CCTATGAACA TGAGGGCGCA TATCTTGGCG GCCTCGATCA GGCGATCGCG ACGCGCAACC ACGGCGGGCT GGTGATCGCG CAAGTCAAAC GCGTGACGGC GGCGGGCAGC TTGCGGCCCC ACGATGTCCA TGTGCCGGGG CATCTGGTGG ATCTGATCGT CGTCGCGCCC GACCAGAAGC AGACGACGGA AACGCCCTAT GATCCGGCCA TTAGCGGTGA GGTCATGCGG CCTTGGGCCT CTTTCGCGCT GGCGGAACAT GGGGTCGAAA AGATCATTGC GCGGCGCGCC GCTATGGAAC TCACGCGCGG GATGACCGCC AATCTGGGCT TCGGGATCTC GGCCATGGTG CCGCGTATTC TGCTGGAAGA AGGGGCCCAC GACGCCGTCA CATGGGCCAT CGAACAGGGC GCTGTCGGCG GCATGCCCCT GACCGGGTTC GCGTTTGGCT GCGCCTCGAA CGCCGATGCC TTCGTGCCCT CTCCCAACCA GTTCAGCTAC TTCCAGGGCG GCGGGTTTGA CGTGTCCTTC CTGTCGTTCA TGGAGGTCGA CGTGGACGGC AACGTGAACG TGTCGAAACT TGGCAAGAAA CCCTACCTGA CGGCGGGATG CGGCGGGTTC GTGGACATCA CGGCCCACGC CAAGAAGATC GTCTTCAGCG GATTTTTCGA GGCAGGCGGC CAGTTTGACG TCACCGACGA CGCCCTGACC ATCACCAAGC CGGGCAAATT CACCAAGATG GTGGAGACGG TCGAACACGT CACCTTCGCG GGCCGCCGGG CGCGGGCGCG GGGGGCGGAT GTCCTTTATA TCACCGAGCG GTGCGTGATG CGCCTTGGCG ACGACGGGTT GATCGCCACT GAAATCATGC CCGGCATCGA CCCCGACCGG GACATCGTCT CCGCCAGCGC AGGCCGCGTC ACCGTCGCGC AGAATGCGGT GACGCTCTCG ACGTCCCTTC TGCAACACGC GCCGATGGGA TTGCAGCCAT GA
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Protein sequence | MGKIVTGAEA AGQIKDCAVV TVSSSSALGC PDAVLQAIGA RFDAEGHPQN LTTIHPIAAG DMYGVKGVDH IAKDGLLSRI IGGSYPSGPS SLPMPEIWQM VVEDRVAAYN VPSGILYDMH RDVAARRPGV LTQVGLETFV DPIREGCAMN ASADAAPIVS RVEFAGDTWL HFPNIVPDVA IIRATTADEN GNLTYEHEGA YLGGLDQAIA TRNHGGLVIA QVKRVTAAGS LRPHDVHVPG HLVDLIVVAP DQKQTTETPY DPAISGEVMR PWASFALAEH GVEKIIARRA AMELTRGMTA NLGFGISAMV PRILLEEGAH DAVTWAIEQG AVGGMPLTGF AFGCASNADA FVPSPNQFSY FQGGGFDVSF LSFMEVDVDG NVNVSKLGKK PYLTAGCGGF VDITAHAKKI VFSGFFEAGG QFDVTDDALT ITKPGKFTKM VETVEHVTFA GRRARARGAD VLYITERCVM RLGDDGLIAT EIMPGIDPDR DIVSASAGRV TVAQNAVTLS TSLLQHAPMG LQP
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