| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3659 |
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| Symbol | |
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| ID | 3936137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3732929 |
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| End bp | 3734248 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906035 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_511601 |
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| Protein GI | 89056150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.19276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGAA CGCTCCTCGC CATGCTCCTC GCCGCAATGC TCTGCGGGCC GGTCATTGCA
CAAACGGAGG GCAGCCAGCC CGATGGCACC ATTGCCGTGG AAAGTGACCG GGCCCAGGAC
TTCGCGACCC GCGACAGGAT CATGGATATT CTCGGTCAGC TTGACGGTTA CGGCGATGTG
CGCGCCACCG TGTCCAACGG CATCGTCACG CTGCGCGGGA CGGTCGTGGA TGCGAGCCGG
ATCACCGCGC TCAATGAGTT GGTGGCCCGT GTCGAGGGCG TGGTGGCCAT TGAGAATACC
GTGTCCGAGA GCACCGACGT GGTAGAGCGG TTGAACCCGG CCATCGACCG CATGCGAGAC
CGGCTGGCGC AGGCCGTGGC CTTCTCTCCA CTGATCCTTG TGGCGGTGGG TGCGGGTGTC
CTGATGGTCG CCTTCGGTCT TTGGCTGGCG CGCCGCAGCT GGCCCTGGGA CACCATCGCG
CCAAATGCGT TCATCGCTGA CATCTACCGC CAGATTGTCC GGCTGGCCTT TGTCGTGTTG
GGCATTGTGC TTGCGCTCGA TCTACTGAAT GCGACGGCGC TTCTGGGGAC CATCCTTGGG
GCGGCTGGGA TCGTCGGCCT CGCCATCGGC TTTGCCGTGC GTGACACGGT CGAGAACTTT
ATCTCGTCCA TCATGTTGTC GATCCGCCAG CCGTTTCGCC CAAAAGATCT GGTGGAGATT
GAGGGCGATA TGGGGCACGT CATCCGCCTG ACCAGCCGCG CGACGATCCT TCTCAGCCTC
GACGGAAACC ACATCCGCAT TCCCAATGCG ACGGTCTTCA AGGCCAAGAT TACGAACTTC
ACCCGCAACG ATGAACGGCG GTTCACTTTC CTTGTGGGTG TAGACCCCAA CGCCGATATC
GCGGAGGCGC AGAAGATCAT TCTCGCCGCG TTGAAGGAGC TACCGTTTCT TCTGAAGACA
CCCGGCCCCG GTGTCTGGGT CGAGGGCCTC GGAGCCTCGA CCATCGACAT CACGGCCGCC
GGATGGATCA AGCAGCATGA GACGGGCATC GGCATGGCCA AGGGCGAGGC AATCCGCGTT
GTCAAAGCCC GCCTGGAGGA AGCCGGGATA ACGCTGCCCG AGCCCACTTA TCGCCTGTTG
GGGGCAGACA TTGGCGACGC GTCGAAAACG GCCCCGACAG CCGCTGCTCC ACGCCCCGCG
CAGGTCGAGG TGCAGCACGT GGGCGCTGAT GAGGACGCCG CCCTGCAAGA CATCATTCAG
GCCGAACGCG ACGCCCTGCC CGATGACGAC CTCCTCCGTC AGGAGGCCCC ACAAGAATAG
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| Protein sequence | MIRTLLAMLL AAMLCGPVIA QTEGSQPDGT IAVESDRAQD FATRDRIMDI LGQLDGYGDV
RATVSNGIVT LRGTVVDASR ITALNELVAR VEGVVAIENT VSESTDVVER LNPAIDRMRD
RLAQAVAFSP LILVAVGAGV LMVAFGLWLA RRSWPWDTIA PNAFIADIYR QIVRLAFVVL
GIVLALDLLN ATALLGTILG AAGIVGLAIG FAVRDTVENF ISSIMLSIRQ PFRPKDLVEI
EGDMGHVIRL TSRATILLSL DGNHIRIPNA TVFKAKITNF TRNDERRFTF LVGVDPNADI
AEAQKIILAA LKELPFLLKT PGPGVWVEGL GASTIDITAA GWIKQHETGI GMAKGEAIRV
VKARLEEAGI TLPEPTYRLL GADIGDASKT APTAAAPRPA QVEVQHVGAD EDAALQDIIQ
AERDALPDDD LLRQEAPQE
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