Gene Jann_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3621 
Symbol 
ID3936099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3693349 
End bp3693711 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content58% 
IMG OID637905997 
Productglycine cleavage system protein H 
Protein accessionYP_511563 
Protein GI89056112 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.666557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.082734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA CTGAAGACCA CGAATGGCTG AACGCCGACG GCGACGTTAT CACTGTTGGC 
ATCACCGAAC ACGCCGCCAC GCAACTGGGC GATGTCGTCT ATGTCGAGTT GCCCGAGGTG
GAAACCAAAG TGTCCAAGGG TGACGAAATT GTGGTGATCG AGAGTGTCAA AGCCGCTTCC
GACATCATCG CGCCGCTGGA TGGTGAAATC GTGGAGGTCA ACGACGCGCT CGCCGACAAA
CCCGCCCTCG TCAACGAGGA CGCCATGGGC GCGGCCTGGT TCTTCAAGAT CAAGGTCGAG
AGCGCCGACG CGTTGGACGA CTACATGTCC GAGGACGAAT ACAAGGATCT CGTCGGGGAC
TAA
 
Protein sequence
MKFTEDHEWL NADGDVITVG ITEHAATQLG DVVYVELPEV ETKVSKGDEI VVIESVKAAS 
DIIAPLDGEI VEVNDALADK PALVNEDAMG AAWFFKIKVE SADALDDYMS EDEYKDLVGD