| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3462 |
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| Symbol | truA |
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| ID | 3935936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3512238 |
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| End bp | 3513023 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905836 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_511404 |
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| Protein GI | 89055953 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.209779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGCT ATGCTTTCAG GATCGAATAT GATGGCCACC CGTTCAAAGG GTGGCAACGC
CAGACGGATC TGCCGTCTGT TCAAGGGGCG GTGGAGGCGG CGCTGGCCAA GCTGGAGGCC
GATGTGCCAA CCATCGCCGC CGCAGGGCGC ACCGACACGG GCGTTCACGC TTTGGGGCAG
GTGGCCCATG CCGACATGCA GCGCGATTGG GATCCCTTTC GATTGGCGGA GGCGTTGAAC
TACCACCTCA AACCCGCGCC GGTGGCGATC ACGGCCTGCG CGCGGGCGCA TGACGACTTC
CACGCCCGGT TTTCCGCCAC ATGGCGGAGC TACACCTACC GCATGATCTG TCGCCGTGCG
CCGTTGGTGC ATGCGCGTGG ACATGCCTGG GCCGTGCGCG GCACGCTTGA TGTGACTGCG
ATGGCGGAGG GGGCGAGACA TCTGATCGGC AAGCACGATT TCACCACCTT CCGCGCGACC
CATTGTCAGG CGCTGTCGCC CATCAAGACG ATGGACGAGA TCCGCGTGGA AGAGGTGTCC
TTGCCTGCGG GCACCGAAAT CCGCTTTCAC CTCAAGGCGC AGTCCTTTCT GCACAATCAA
GTCCGTTCCA TCGTGGGTTC CCTGGAACAT GTCGGCTCCG GCGCTTGGGC GCCCGATGAC
ATGCGCCGCG CATTGGAGGC GTGTGACCGG GCGGAATGCG GCACCGTCGC CCCGCCGGAC
GGGCTTTACA TGACCGGCGT GGGATACGAC GAAGACCCCT TCGCGGACGG GTGGAAAGAC
ACATAA
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| Protein sequence | MPRYAFRIEY DGHPFKGWQR QTDLPSVQGA VEAALAKLEA DVPTIAAAGR TDTGVHALGQ
VAHADMQRDW DPFRLAEALN YHLKPAPVAI TACARAHDDF HARFSATWRS YTYRMICRRA
PLVHARGHAW AVRGTLDVTA MAEGARHLIG KHDFTTFRAT HCQALSPIKT MDEIRVEEVS
LPAGTEIRFH LKAQSFLHNQ VRSIVGSLEH VGSGAWAPDD MRRALEACDR AECGTVAPPD
GLYMTGVGYD EDPFADGWKD T
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