| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3073 |
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| Symbol | |
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| ID | 3935544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3106653 |
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| End bp | 3107507 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905444 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511015 |
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| Protein GI | 89055564 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.446798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0908777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG CAGAACAGTC CCCGGCGCGC GCGATGGCCC GCTCGCCCGC AAAGGTCAGT
CGCACGCGCG GCCACGTGGT CGAGCGTATT GTCTGGATCG CCGGAATTGG CGCCATTCTC
GCCTTCCTGT ACCTGCCGAT CGTCGTACTG GTGGCCTACA GCTTCAACGC TTCCCGGTCG
CTGAGTTGGC CGATGACGGG CTTCACGCTC GACTGGTATC GGAGGCTGGC CGAGAACGAG
CAGCTGATTG AGGCGCTCTA CAACTCTCTG TATGTCGCGT CCTCGGCCAC GGTCCTGACA
TTGATCATCG GTGTTCCTGC GGCCATCGCA CTGGACCGGA TGGACTTTCC CGGCAAAGGC
ATATTCCGCA AGCTGGTCCT TCTTCCCATC GCGCTTCCGG GGATCATCAC CGGTATTTCG
ATGTTGACGC TGTTCCGTCT GTTCGGCTTC AACTTGAGCC TTGAGACGGT CATCATCGGC
CATGCCACGG CTTTGCTTGC CGTTGTCGTG ACCCAGGTTT ACGCGCGGCT CCAGCGGGTC
CCTGCCAGCT ATGCCGAGGC CTCTGCCGAT CTGGGGGCCA ACGGACTTCA GACGTTTTTC
TTCGTGACGC TGCCCAACAT CCGTTCGGCC GTGATCGGGG CGGGTCTTCT GGGTTTCACC
CTCAGCTTTG ACGAAATCCC GGTGACCTTC TTCCTGACCG GGCGCGACAA CACGTTGCCC
ATGTATATCT GGTCCACCAT GCGGCGTGGT TTGACCCCGG AAATCAACGC CGTTGGCGCG
CTTATCGTGC TTGCCTCGGC CATCCTCATC ATCATTTCAG TCGTGCTTCT TCGAGAGAAG
CCCAATGCCC GATGA
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| Protein sequence | MSIAEQSPAR AMARSPAKVS RTRGHVVERI VWIAGIGAIL AFLYLPIVVL VAYSFNASRS
LSWPMTGFTL DWYRRLAENE QLIEALYNSL YVASSATVLT LIIGVPAAIA LDRMDFPGKG
IFRKLVLLPI ALPGIITGIS MLTLFRLFGF NLSLETVIIG HATALLAVVV TQVYARLQRV
PASYAEASAD LGANGLQTFF FVTLPNIRSA VIGAGLLGFT LSFDEIPVTF FLTGRDNTLP
MYIWSTMRRG LTPEINAVGA LIVLASAILI IISVVLLREK PNAR
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