| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2588 |
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| Symbol | |
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| ID | 3935051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2597511 |
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| End bp | 2598770 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904952 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_510530 |
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| Protein GI | 89055079 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000485668 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATA GAACCCGGAA CACCCTTGCT GCCCTCGCCA CCTCCGCCGC CGCATTAAGT
GCCGCGGGTG CCGTAACGGC CCAAGAGGTC ACGATTGAAT ATTGGCAGTA TTTCTTTGAG
GCCCGCGTGA ATGCGATGGA GCAGCTGATC GAGAATTTTG AGGCCGCGAA CCCGAACATC
AACGTGGAAA TGACCCACTT CCCCTATGCG GATTATCGCA CGCGGACGGC CGTTGCCGTG
CCGTCGGGCG AGGGTCCCGA TATCGTGCAG CTCTTCTACG GTTGGTTGAA CGATTACATC
GACGAGGGCC TGATCCAGCC ACTTCCCGTA GATACCTTCT CGCCCGAGAT GGTGGAGGCC
GAGTTCTTCC CCATGGTCCA AGCCATGGAG CGTGATGGCC AATATTTCGC CCTGCCCACC
GCCGTGCGGT CGCTGGCCTT GTTCTATAAT GAGCGCATTC TGGATGCCGC CGGCGTCGAA
GTCCCCACGA CGCTGGACGA ACTGGTCGCC GCCGCCGCCG CCACGACGGA GCGTGATGGC
GCAGGCAACA TCACGCAGGT GGGTTTCACC ACCGGCATGA CCGCTCAGGA TCACCATTGG
TTCCGCGAAG TGCTTGTCCG CCAGATGGGG GGTGAGCCCT ACACCGACGG CTATCAGACG
GTGAATTACG ACACCGACGC AGGCCGCGCG GCATTGGACT TCTATCTTGG CCTGGAAGAG
CAGGGCGTGA CGCAATCGGG CTTCATGGAT GAACCCCAGG CGGCCTTCCG CGCGGGCCGC
GCCGCGTTTC ATATCGACGG ATCATTCCGC ATCGGCGCGC TGAACGGAGA GCGGGGCCTG
CAATGGGGCG TGACGGAGCT TCCGGCCAAC AATGACGGGG TGCGATCAAA CTATTCATCC
TACTGGGTGA ACGCGATCAC GTCGTCTGCT GAAGGTCCCG AATACGACGC CTCCGTCCTG
TTCATGGAGT ATATCACCTC GGCTGAGGCG ATGGAGATCT GGCTTGAAAC CGTGGGCGAA
CTGCCCGCCC GCGCAGAGGT CGGCATGACG GAAGAAAACG CCAACGATCC GGTGTTTGGC
CCGTTTATTC GCGGCCTTGA ATACGCCAAC ACCACGATCT TCGCCGACGA GAGCGCGCAG
CGCCAGGGCA TGGTCGACAT GGTGGAGCGG GTGCAGCTGC AAGATATGGA TCCGGGCGAA
AGCCTGACCA TCGCGGCCGA GGCCGAGCAG ACCCTGCTCA ACGAATACTA CAGCGACTGA
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| Protein sequence | MLHRTRNTLA ALATSAAALS AAGAVTAQEV TIEYWQYFFE ARVNAMEQLI ENFEAANPNI
NVEMTHFPYA DYRTRTAVAV PSGEGPDIVQ LFYGWLNDYI DEGLIQPLPV DTFSPEMVEA
EFFPMVQAME RDGQYFALPT AVRSLALFYN ERILDAAGVE VPTTLDELVA AAAATTERDG
AGNITQVGFT TGMTAQDHHW FREVLVRQMG GEPYTDGYQT VNYDTDAGRA ALDFYLGLEE
QGVTQSGFMD EPQAAFRAGR AAFHIDGSFR IGALNGERGL QWGVTELPAN NDGVRSNYSS
YWVNAITSSA EGPEYDASVL FMEYITSAEA MEIWLETVGE LPARAEVGMT EENANDPVFG
PFIRGLEYAN TTIFADESAQ RQGMVDMVER VQLQDMDPGE SLTIAAEAEQ TLLNEYYSD
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