| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2453 |
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| Symbol | |
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| ID | 3934910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2444739 |
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| End bp | 2447057 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904811 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_510395 |
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| Protein GI | 89054944 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0002154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTCCTTC GTGCATTTAT GCATCTGACG CGTTGCGTAG GGCGGTGTGT TGCCCCTGCA
CTTCTTATGT TGTCTCTGGT GGCTGTCGCC GCTCCGGCTG ACGCGCAGGG CTTTCGTTTC
AACAGTTTCG ACGTTCAGGG AAACCAGCGC ACCAACGATG CGTCGGTCCT TCAGGTCGCG
GGTCTGGCCC CGGGCACGAC AGTCTCTGCC GGGCAGGTCA ATGATGCGTT GCAACGCTTG
CAGAACTCCG GCCTGTTTGA GTCCGTTGAG GTCGCACCGC GCGGGAATAC GCTGGTCATC
TCGGTCGTTG AATATCCCAC GATCAACCGG ATCGCGGTTG AGGGCAATCG CCGCCTGGAC
GACGATGAAT TGCTGGCGGT GCTGCAATCC ACGCCACGGC GCGTCTTCTC TCCCATCACG
GCTGAACGTG ACGCCGCCGC CATCGCAGAG GCCTACCGCG TCACCGGTCG TCTGACGGCC
ACCGCGACGC CGCAGATCAT TCGCCGCGAC GACAACCGCG TCGATCTGGT GTTCGTGGTG
ACGGAAGGGT CCGTCGTCGA AACCCAGCGC ATCGCCTTTG TGGGCAACCG TGATTACTCG
GATCGCCGCC TGCGGCAGAT CCTGGAATCC ACCCAGGCCG GTCTGTTCCG TGCGCTGATC
CGCTCGGACA CGTTTATTGA GGATCGCATC GCGCTGGACC GCCAGCTGTT GACGGATTTC
TATCAGGATC GCGGCTATAT TGACTTTGCG ATCCAGTCCG TGACGCCTGA GCTGAGCCGG
GATCGGGGCG CGTATTTCGT GACCTTCAAC ATCCGCGAAG GGCAAAGCTA CCGCGTGGGC
AACCTGTCGG TTGTCTCTGA ATTCCCTGGC GCGGACCCGG CGCTGTTCCA GGGCGCGATC
AACATCCGCC AGGGCGTGCG CTACAGCCCC CGCATCATCG ACAACGCGAT CACGCGGATG
GAGAACCTCG CCTCCGACCA GGGCCTGCGC TTTGTGCGGA TTGAACCGCG CCTGACCCGC
GACAATGCCA ATCTGATCGT CAATGTCGAG TTCGTCATCA CCCGTGGAGA GCGCGTGTTT
GTTGAGCGGA TCGATATTGA AGGCAACCAG ACCACCCTGG ACCGCGTCAT TCGCCGCCAG
TTCGATGTGG TCGAAGGTGA TCCGATGGAT GCCCGCCAGA TCCGCGCCGC CGCCGAGCGT
ATTCGCGCCA CCGGCTTCTT CGCGGATGTG CAGGTGGATG GCCGTCGCGG CACGACGCCC
GAGCAGGTGA TCGTGGACGT GGATGTGGAA GAGCAGCCGA CAGGCTCGCT TGGCTTCTCG
GCCAGCTACT CAACCGATTC CGGTGCCGGT CTTGCGGTGA ACTTCTCGGA AGAGAACTTT
CTGGGGCGGG GGCAGGCGGT TGCCGTTGGC TTCAACACGA CCGAAGGCTC GCAATCCCTG
AACTTCTCCT TCACGGAACC GGCCTTGCTG CGCCGCGATC TGGAATTTGG GGTCAGCGCA
TACTACGCCA TTGAAGAGGA CAACGACTCG GACGCCGAAT CGACGAGCTA TGGCGTCGGC
ACGAGCCTTG GGTTCCCGAT CAGCGAAAAC AGCCGTCTGC GCCTGTTCTA CAACTTTGAC
CACGATGAGA TTGTCGGCCG TGACCCTGCT TTGGACTCCG CGATCTTGCT GAACGAAGCG
TCCGAGGCTG ATACGTCCCG GGTGGGCTTC ACCTACAGCT TTGACAACCG CGCCACTGGC
CTGAACCCCA ATGCCGGCGT CGCATTTGCC TTTACCGGTG AATATGCGGG TCTGGGCGGC
GACACGGAAT TCATCCGGGC TCGCGTTCGC GCTCTGGCGG AGACGCGGAT CGCGCGGGAA
GAAGTCACCC TGCGCGCCAC GTTGGAAGGG GGCGTCATCA ATGCGCTGGA CGGCGGCACC
CGCGCGTCCA ACCGCTTCTC GCTTAGCTCG CGTCAGATGC GCGGCTTTGA AAGTGGCGGC
CTCGGGCCTC GGGACACCGG CGCCACCAAC GAAAACGCCC TTGGCGGCAA CTACTTCGCC
GTGGCGCGGT TCGAAGCGGC TTTCCCCATC GGATTGCCCG AAGAATACGG GATCTCCGGC
GGTGCGTTCT TCGACGTCGG ATCGGTCTGG GGGCTGGATG ACACCGCAGG CAGCATGGGC
ACGGTCGACG ATGAGTTCCG CCTGCGAACG GTGGTCGGTG TGTCGGTGTT CTGGGACACG
GCGCTTGGTC CGCTGCGCTT CAACTTCTCG CGCCCGATTG AGTTTGAAGA CTATGACCGC
ACGCGGGAGT TTGACTTCAC GGTCGAGGCC CGTTTCTAA
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| Protein sequence | MVLRAFMHLT RCVGRCVAPA LLMLSLVAVA APADAQGFRF NSFDVQGNQR TNDASVLQVA
GLAPGTTVSA GQVNDALQRL QNSGLFESVE VAPRGNTLVI SVVEYPTINR IAVEGNRRLD
DDELLAVLQS TPRRVFSPIT AERDAAAIAE AYRVTGRLTA TATPQIIRRD DNRVDLVFVV
TEGSVVETQR IAFVGNRDYS DRRLRQILES TQAGLFRALI RSDTFIEDRI ALDRQLLTDF
YQDRGYIDFA IQSVTPELSR DRGAYFVTFN IREGQSYRVG NLSVVSEFPG ADPALFQGAI
NIRQGVRYSP RIIDNAITRM ENLASDQGLR FVRIEPRLTR DNANLIVNVE FVITRGERVF
VERIDIEGNQ TTLDRVIRRQ FDVVEGDPMD ARQIRAAAER IRATGFFADV QVDGRRGTTP
EQVIVDVDVE EQPTGSLGFS ASYSTDSGAG LAVNFSEENF LGRGQAVAVG FNTTEGSQSL
NFSFTEPALL RRDLEFGVSA YYAIEEDNDS DAESTSYGVG TSLGFPISEN SRLRLFYNFD
HDEIVGRDPA LDSAILLNEA SEADTSRVGF TYSFDNRATG LNPNAGVAFA FTGEYAGLGG
DTEFIRARVR ALAETRIARE EVTLRATLEG GVINALDGGT RASNRFSLSS RQMRGFESGG
LGPRDTGATN ENALGGNYFA VARFEAAFPI GLPEEYGISG GAFFDVGSVW GLDDTAGSMG
TVDDEFRLRT VVGVSVFWDT ALGPLRFNFS RPIEFEDYDR TREFDFTVEA RF
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