Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2232 |
Symbol | |
ID | 3934686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2237171 |
End bp | 2238355 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637904589 |
Product | ammonium transporter |
Protein accession | YP_510174 |
Protein GI | 89054723 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGAG CGGACACCGC ATGGATCATC GTCGCCACGG CGCTGGTCCT CTTTATGTCA TTGCCAGGAC TGGCGTTATT TTACGGCGGC CTGGTGCGCG CACGAAACGT GTTGAGCGTC TTCATGCACG TCTATGCGAT TGCCGCATTG ATGAGCCTCC TGTGGCTCGC GGTCGGGTAT TCCATCGCGT TTGGGCCGGG TGACAGCGGC TATTGGGGCG GGCTGGAGCG CGCATTTCTG ATCGGTGTAA CCGCCGAAAC GCTATCGGGC ACCCTGCCCG AGGTGTTGTT TTTCGCCTTC CAGATGACCT TCGCGATCAT CACGCCCGCG CTGATCGTGG GCGCATATGT TGAACGGATC GGCTTCGGCT TCGTTCTGTT GTTTTCCGCG CTTTGGATGC TGATTGTCTA CGCACCCGTC GTGCATTGGA TCTGGGGCGG AGGCATGTTG TCGGATGGCG GCCTTTTGGG TGAAATTGGC GTGCGCGACT TCGCGGGCGG CATCGTGGTC CATGAGACGG CAGGTCTGGC TGCACTGGTT CTTGCGGTGA TGTTGGGCGC ACGCAAGAAC AACACCACGC CGCCCCACAA TCCCGGCATG GTGATGATCG GCGCGGCGAT GCTGTGGGTC GGTTGGTTCG GCTTCAATGG CGGCAGCCAG CTGGCCGCGG ATGGCGGGGC CGCGATGGCG CTGACCGTCA CCCATATCTC GGCCGCGGCG GCAACGCTGA CCTGGGGACT TTGGGAGAAG GTCAAATACG GCAAGGTGTC TCTCGTGGGC ATCGTGACGG GCACGATTGC GGGGCTCGCC TCGATCACAC CGGCCTCCGG CTTTGTCGGA CCCGTGGCTG CGCTAATCAT CGGCTCAGTC GCGGGCATCC TGTGCCAGGA AGCGGTGAAC CTGATCCGCA ACAAAGCACG GATCGACGAC ACGCTGGACG TGTTTGCCGT CCACGGCGTC GGCGGCATTT TCGGGACGAT CATGATTATT GTATTCGGAA CCGACGTCAG CGCAGTCGCA CAATTCGGCG GTCTGCTGAT CGTGGGCGTC TATACGGTTG TTTTGACGGT CATCATTGCC AAGGTCGTGG GTCTGATCAC ACCTCTTCGG GTCGATGAAG AGGCCGAGGT GACGGGACTG AATATCACCG TTCACGGCGA GCGGGCCTAT GACATGAGCT CGTAG
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Protein sequence | MNGADTAWII VATALVLFMS LPGLALFYGG LVRARNVLSV FMHVYAIAAL MSLLWLAVGY SIAFGPGDSG YWGGLERAFL IGVTAETLSG TLPEVLFFAF QMTFAIITPA LIVGAYVERI GFGFVLLFSA LWMLIVYAPV VHWIWGGGML SDGGLLGEIG VRDFAGGIVV HETAGLAALV LAVMLGARKN NTTPPHNPGM VMIGAAMLWV GWFGFNGGSQ LAADGGAAMA LTVTHISAAA ATLTWGLWEK VKYGKVSLVG IVTGTIAGLA SITPASGFVG PVAALIIGSV AGILCQEAVN LIRNKARIDD TLDVFAVHGV GGIFGTIMII VFGTDVSAVA QFGGLLIVGV YTVVLTVIIA KVVGLITPLR VDEEAEVTGL NITVHGERAY DMSS
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