Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1964 |
Symbol | |
ID | 3934415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1957806 |
End bp | 1958483 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637904318 |
Product | HhH-GPD |
Protein accession | YP_509906 |
Protein GI | 89054455 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0340706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.441447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTGTCA CGTTTTGTGG CGGCGCACGG CGGATGTGGC CCTGGACCGA GACCTGGAAC CGCAAGATGC GCATAGAGAC CGATGAAGAT GTGGCGGAGG GCTTTGATCG CCTCCGAAAG ATCGAGCCGA AGTTTGCAGT GATTTCAGGG CCTTTGCCGC TGCGGCGCAG GCCGGACGGG TTCGGCGCGC TCTTGCATGC GATTGTGGGC CAGCAGGTGT CTACGGCGTC AGCGGCGGCG ATCTGGGGGC GGGTTCAGTC CGCCGGCCTG CATCAGGAGA CGGCGGTGGC CGCAGCGACT GAGGAGGCGT TGCGCGGCTG CGGCTTGTCG CGACCCAAGG TGCGTTATGC CAAAGCGCTG TCGGAGGCGC GGATCGACTA CGCAGCCCTG CGGGACGCGC CCTTGGACGA CGTGCTGGCC ACGTTGATCG CGGTGCCGGG CATCGGGCGC TGGACGGCGG AAATCTACGC CAAGTTTGCG CTGGGTCACG CGGATGTCTT TGCCGCCGGG GATCTGGCCT TGCAGGAGGG GGCCAGGCTG CTGTTCGATC TGCCCGAGCG ACCTGCCGAG AAAGAGATGC GCGCCATGGC CGAGGCCTGG ACGCCGGTCA GGGCCATTGC CGCCCGCGCG CTCTGGGCCT ACTACCGGGA AAAGACCAAA CGGGAGGGCG CGATATGA
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Protein sequence | MGVTFCGGAR RMWPWTETWN RKMRIETDED VAEGFDRLRK IEPKFAVISG PLPLRRRPDG FGALLHAIVG QQVSTASAAA IWGRVQSAGL HQETAVAAAT EEALRGCGLS RPKVRYAKAL SEARIDYAAL RDAPLDDVLA TLIAVPGIGR WTAEIYAKFA LGHADVFAAG DLALQEGARL LFDLPERPAE KEMRAMAEAW TPVRAIAARA LWAYYREKTK REGAI
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