Gene Jann_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1702 
Symbol 
ID3934150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1685805 
End bp1686239 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID637904053 
Producthypothetical protein 
Protein accessionYP_509644 
Protein GI89054193 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00638023 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGG TGGAAATCGA GATCGGCACC CGCATATTCA GCGTGGCCTG CCAGGAGGGC 
GAGGAGCCGT TCCTGCGCTC TGCCGCGAAG ATGCTGGACA CAGAAGCGGC CGTCGTGCTG
GGACAGATCG GGCGGATGCC GCCCGAGCGG ATGCTGTTGA TGGCGGGCCT GATGCTGGCC
GACAAGACGG CGGCGCTGGA GGATGACCTG CGGGAATTGC AGGACAAGAT CGCGACCCAG
GACCGCGCGC TGCACACCGC CGAGGAGCGG TTGGCCGACC GGGGCCGCAA GATTGCAGAA
TTGCAGGATG CAGGCCCGGC GGGCGGCGTG CCTGTGCCGG AGGACCTGAG CGAAGGCCTT
GCCGCGCTGG CCGCCAAGGC CGAGGCGATG GCCGAGATGC TGGACCCACC CTCCGGGAGC
GCCTCTGGCG GGTAG
 
Protein sequence
MPEVEIEIGT RIFSVACQEG EEPFLRSAAK MLDTEAAVVL GQIGRMPPER MLLMAGLMLA 
DKTAALEDDL RELQDKIATQ DRALHTAEER LADRGRKIAE LQDAGPAGGV PVPEDLSEGL
AALAAKAEAM AEMLDPPSGS ASGG