Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1702 |
Symbol | |
ID | 3934150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1685805 |
End bp | 1686239 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637904053 |
Product | hypothetical protein |
Protein accession | YP_509644 |
Protein GI | 89054193 |
COG category | [S] Function unknown |
COG ID | [COG3027] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00638023 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGG TGGAAATCGA GATCGGCACC CGCATATTCA GCGTGGCCTG CCAGGAGGGC GAGGAGCCGT TCCTGCGCTC TGCCGCGAAG ATGCTGGACA CAGAAGCGGC CGTCGTGCTG GGACAGATCG GGCGGATGCC GCCCGAGCGG ATGCTGTTGA TGGCGGGCCT GATGCTGGCC GACAAGACGG CGGCGCTGGA GGATGACCTG CGGGAATTGC AGGACAAGAT CGCGACCCAG GACCGCGCGC TGCACACCGC CGAGGAGCGG TTGGCCGACC GGGGCCGCAA GATTGCAGAA TTGCAGGATG CAGGCCCGGC GGGCGGCGTG CCTGTGCCGG AGGACCTGAG CGAAGGCCTT GCCGCGCTGG CCGCCAAGGC CGAGGCGATG GCCGAGATGC TGGACCCACC CTCCGGGAGC GCCTCTGGCG GGTAG
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Protein sequence | MPEVEIEIGT RIFSVACQEG EEPFLRSAAK MLDTEAAVVL GQIGRMPPER MLLMAGLMLA DKTAALEDDL RELQDKIATQ DRALHTAEER LADRGRKIAE LQDAGPAGGV PVPEDLSEGL AALAAKAEAM AEMLDPPSGS ASGG
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