| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1574 |
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| Symbol | |
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| ID | 3934022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1552377 |
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| End bp | 1554497 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637903925 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_509516 |
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| Protein GI | 89054065 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.226882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAGG CCCTTCAAAC CGCCCTCGAT GCCCAGGGGT ATGACACCCT CACCCCGGTT
CAGCAGGCCG TCACCGACCC GGATCTGACG GGCAAGGACC TGCTGGTGTC GGCCCAGACG
GGCTCGGGCA AGACGCTGGG GTTTGGCCTG GCGATTGCAC CGCAGCTGTT TGGCGAGGCC
GAGGCCTTTG GCGCGGCTGG CGCGCCCCTG GCGCTGGTTA TTGCGCCGAC ACGCGAATTG
GCGATGCAGG TGAAACGGGA ATTGTCGTGG CTGTTCGCGC AGGCAGGCGC GACACTGGCC
TCCACCGTTG GCGGCATGGA CATGCGCGAT GAGCGGCGGG CGCTGGCACG CGGGGCGCAT
ATCGTTGTGG CCACGCCGGG CCGGTTGAAG GACCACATCA TGCGCGGGTC GATTGACCTG
TCTTCCCTGA AAGCCGTGGT GCTGGATGAG GCTGACGAGA TGCTGGATCT GGGGTTCCGG
GAGGATCTGG AGTTCATCCT CGACACATCC CCCGCCGACC GACAGACCCT GATGTTCTCG
GCCACTGTGC CTGCAGCCAT CGCGCGGTTG GCGCAGAACT ACCAGAAAGA CGCGGTGCGC
GTCGCCACGA CCACGGGCGA AAAGCAGCAT TCCGACATTG AATATCGGGC GCTGACCGTG
TCCGCGCGCG ATGGCGAGAA CGCGATCATC AACGTGCTGC GCTTCTATGA GGCCCCCAAC
GCCATCGTCT TTTGCAACAC CCGCGCGACG GTGAACCGCA TGACCACGCG GCTGTCGAAC
CGGGGCTTCT CCGTCGTGGC TTTGTCTGGC GAGTTAACGC AATCAGAACG CACCAACGCC
TTGCAGGCCA TGCGCGACGG GCGCGCGCGG GTCTGTGTGG CGACCGATGT GGCCGCGCGC
GGCATCGACC TGCCCAATCT GGAACTGGTG ATCCACGCGG AATTGCCCAC GAACCAGGAC
ACGCTGCTGC ACCGGTCGGG CCGGACGGGT CGCGCGGGGC GCAAGGGTGT GTCCGCGTTG
ATCGTGCCGC CCGCCGCGCG GAAGAAGGCG CAACGGTTGC TGGGGTGGGC GAAGCTGACC
GCCGTCTGGG CCGAGGCCCC GTCCGCCGAT GAGGTCACGG CCCGCGACGA CGCGCGCATG
ATGGAGGATG CGGATTGGGA CGCCGAGGTC CAAGACTCCA ATCGTGAAGC TGTGGATAAG
TTGGTGGATA AGTACTCCGC CGAGCAATTG GCCAGTGCGT TCGTGCGCAT GTACCGCGAG
AAGCGATCTG CCCCGGAAGA GCTATCCGAT GCCTCTGCCG CGCCCGAGCC GCGCAAGGCG
TTTGGACCCA GCGTGTGGTT CTCTCTCGCC GGGGGGCAAG CCGTGGGCGC AGAGCCGCGC
CGCCTGCTGC CGATGCTGTG CAAGATGGGC AATATCACGC GCGACGATGT CGGAGCGATC
CGCATCCATC ACGAGGCGTC GTTCATCGAG CTGCGCGAGA GTGCGGTGGA TGGGTTCCTG
GCCGCCGTCG GTGGTAAGAT GGAGATGGAA GACGGCGCGG CCCTGACCCG TCTGGAGGCT
GCGCCAAATG TTGAGCGCGC ACCCCGTCCC CCACGCCCCC CGCGCGGGGA AAAGCCACCT
CGGACCAATA AATCCAACGA CCGCAGGACC AGGCGAGAGG CGGAGACCGC ACCAGAGCCC
GCAGCAGCAC GCGCGCCGAC GCCTGCGCCC AAACCGCAAT CGTCCAAACC GATTGACTGG
AACGATGCCC CCGCCCCCCG CGCGAGGAAG CCGAAAAAAC CGGCCGCAGG CGGCAAGCCT
GCCCGGCCCC GCGCGCCTGA CAGCAAGCCC GACCTGCCCC AAGCCGATCC CTGGAAGGCC
CGCAAGCCGC GCCACAAATC CAAATCGGCG GGCGATGGGT TCGAGCGTCC CACACGGTCC
GGGGGCAAAC CGGGTGGAAA GCCGGGCGGG AACCCCGCCA CCAAACCCGG CGCACGACTG
GGCGCACCGA CCACGGGAAA GCCCAACAGC AAGAAAAACA AGGCCCGCCG GGCGGCGGCG
GCAGAAGCCT CGGGGGGTGG CGCACCAAAG CCCCGCAAGC CACGCGCACC CAAATCAAAG
AAATCCAAAG GGCCATCCTA G
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| Protein sequence | MKQALQTALD AQGYDTLTPV QQAVTDPDLT GKDLLVSAQT GSGKTLGFGL AIAPQLFGEA
EAFGAAGAPL ALVIAPTREL AMQVKRELSW LFAQAGATLA STVGGMDMRD ERRALARGAH
IVVATPGRLK DHIMRGSIDL SSLKAVVLDE ADEMLDLGFR EDLEFILDTS PADRQTLMFS
ATVPAAIARL AQNYQKDAVR VATTTGEKQH SDIEYRALTV SARDGENAII NVLRFYEAPN
AIVFCNTRAT VNRMTTRLSN RGFSVVALSG ELTQSERTNA LQAMRDGRAR VCVATDVAAR
GIDLPNLELV IHAELPTNQD TLLHRSGRTG RAGRKGVSAL IVPPAARKKA QRLLGWAKLT
AVWAEAPSAD EVTARDDARM MEDADWDAEV QDSNREAVDK LVDKYSAEQL ASAFVRMYRE
KRSAPEELSD ASAAPEPRKA FGPSVWFSLA GGQAVGAEPR RLLPMLCKMG NITRDDVGAI
RIHHEASFIE LRESAVDGFL AAVGGKMEME DGAALTRLEA APNVERAPRP PRPPRGEKPP
RTNKSNDRRT RREAETAPEP AAARAPTPAP KPQSSKPIDW NDAPAPRARK PKKPAAGGKP
ARPRAPDSKP DLPQADPWKA RKPRHKSKSA GDGFERPTRS GGKPGGKPGG NPATKPGARL
GAPTTGKPNS KKNKARRAAA AEASGGGAPK PRKPRAPKSK KSKGPS
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