| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1353 |
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| Symbol | |
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| ID | 3933800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1317173 |
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| End bp | 1318207 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903703 |
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| Product | ABC transporter related |
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| Protein accession | YP_509295 |
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| Protein GI | 89053844 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.275168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTT TGACCCTCAA AAACGTCACC AAATCCTTCG GCAAGGTGCA GGTGCTGCAC
GATATCAATC TGGAGGTTGA GGACGGAGAA TTCGTCGTCT TCATCGGCCC GTCCGGCTGC
GGCAAGTCCA CGCTGCTGCG TGTCATTTCC GGGCTGGAAG ATGCCACAAG CGGCGAGATC
AGCATTGGCG GCGATGCTGT TAACGCCGTC CCGCCCGCCA AACGTGGTAT CGCGATGGTA
TTCCAGTCCT ATGCCCTCTA TCCGCACCTG ACCGTCAAAG GGAACATGGC CCTTGGCCTC
AAGCAGGAAA GGCGCCCAAA GGATGAGATT GAGGCGCGTG TGACCGAGGC TGCGCGGATG
CTATCGCTTG GCGAGTATCT GGATCGGCGT CCGTCCGAGC TGTCGGGTGG GCAGCGCCAG
CGCGTCGCCA TTGGCCGCGC TGTGGTGCGC CAGCCCAAGT TGTTCCTCTT TGATGAGCCG
CTCTCCAACC TCGACGCAGC GCTGCGGATG AACACGCGGA TCGAGATCGC GCGCCTGCAC
CGCACGCTGG ACGCCTCCAT GGTCTACGTC ACCCACGACC AGACCGAAGC GATGACCTTG
GCCGATAAGA TCGTCGTGCT GCGCGATGGT CGGGTGGAAC AGGTCGGCTC CCCCATGGAG
CTGTATAACA ATCCCGCCAA CCAGTTCGTC GCGGGCTTCC TTGGCGCGCC ATCGATGAAC
TTTCTGCCCG CAGAGACGGT CGGCGGCACC CCCGGCACAA CCATTGGCAT CCGCCCGGAA
CACATCCGCC TGTCGGACAA TGGGCGGATC AAGGCGGTGG TCAGCCATGT GGAAAATCTG
GGCGGGGACA CTAACGTCCT GCTGGAGATT GCCGATGGCA CACAGATGAC CGTCCGGCTG
TTCGGCCAGC ACCATGTCGC GCCCGATGAG GCCACGTCGA TCACGTTTGA CGACGCCGAT
ACCTATCGCT TCGACCAATC GGGCGCGCGC ATCCGGACCA ACCCGAACGT GGCGGAACCG
GTGCTGTCAG ATTAG
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| Protein sequence | MTALTLKNVT KSFGKVQVLH DINLEVEDGE FVVFIGPSGC GKSTLLRVIS GLEDATSGEI
SIGGDAVNAV PPAKRGIAMV FQSYALYPHL TVKGNMALGL KQERRPKDEI EARVTEAARM
LSLGEYLDRR PSELSGGQRQ RVAIGRAVVR QPKLFLFDEP LSNLDAALRM NTRIEIARLH
RTLDASMVYV THDQTEAMTL ADKIVVLRDG RVEQVGSPME LYNNPANQFV AGFLGAPSMN
FLPAETVGGT PGTTIGIRPE HIRLSDNGRI KAVVSHVENL GGDTNVLLEI ADGTQMTVRL
FGQHHVAPDE ATSITFDDAD TYRFDQSGAR IRTNPNVAEP VLSD
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