| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0086 |
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| Symbol | |
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| ID | 3932522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 80706 |
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| End bp | 81965 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902427 |
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| Product | (Uracil-5)-methyltransferase |
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| Protein accession | YP_508028 |
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| Protein GI | 89052577 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCTC TCCGGCAGTG CCCCGTGCCT GAGGTCACAA TCACCCGCCT CGGCCACCTT
GGAGACGGCA TCGCGACTGA CGATCACGGT GGCCCCATCT TCGTGCCGCT GACCCTTCCC
GGAGAGGTCG TGTCCGGGGA GATCTACGGC GACCGCATCG CCGCCCCGTC TGTGATCACA
CCCTCGTCCG ATCGCGTGAA AGCGCCCTGC CCGCACTACA AATCCTGTGG CGGGTGCAGT
TTGATGCATG CCTCCGACCC GTTTGTCGCG ACGTGGAAAG AAAATGTGAT CACAACGGCT
TTGCAGGCCC ACGATCTTCC CACACCCCTG CGCCCCATCG TGACCTCCGC CCGCAAGTCC
CGCCGTCGGG CAACCCTTGC CGGTACGCGC ACCAAGAAGG GGGCGATGAT CGGGTTTCAC
GCGCGCAAAT CAGGCACTAT TGTGCCGACT AGAGACTGCT TCTTGCTGGA ACCGGCCCTG
CTGGAAACCC TCCCTGCGCT GGAGAGAATT GTGAAACTGG GCGCGTCACG TTCGGCCACT
TTGGGTCTGG CGCTCACGCT CACGGATACC GGCATCGACC TGCATGTGAC GGGTGCAAAA
CCCCTTGATG GACCGCTTCG CGCCGCGCTT CCGCAGGTGC GGGGCAGCTT TTCGCGCCTC
ACTTGGGGGG ATGAGCCTGT CTATACCGAA ACGCCACCCC GCCTGACCCT TGGCACCGCC
CGCGTCACGC CTCCGCCGGG CGCATTTCTA CAGGCCACAC AAGACGGGGA AGCCGCGCTG
CAGGCGGCGG TCGCAGAGGC AACGCAGGGC GCCACACACA TCGCGGACCT GTTCTGCGGC
ATCGGTACAT TCACCCTGCC CCTCGCCCAA GCCGCGCCCG TTCATGCCGT TGAGGCCGCG
CCGGACCTGC TCGACGCGCT TGATCATGCC ACACGCTTTG CCACCGGCCT CAAGCCCATC
ACGACCGAGG CGAGAGACCT CTACCGCCGC CCCCTTCTGC CTGATGAGCT GGCAAAATTC
GACGCAATCG TCATCGACCC GCCTCGCGCG GGTGCCGAGG CGCAAACCGA ACAGATCGCC
AAAGCGCACG TACCCGTTAT CGCTGCCGTC TCCTGCAATC CCGTGACCTT CGCGCGCGAT
GCCGCGATCT TAACGAAAGC GGGCTATGCG CTGGATTGGG TGCAACCCGT CGATCAATTC
CGCTGGTCGC CCCATGTGGA ACTTGCGGCG CGGTTCACCC TTGCCCATAT CAGCGATTAA
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| Protein sequence | MRSLRQCPVP EVTITRLGHL GDGIATDDHG GPIFVPLTLP GEVVSGEIYG DRIAAPSVIT
PSSDRVKAPC PHYKSCGGCS LMHASDPFVA TWKENVITTA LQAHDLPTPL RPIVTSARKS
RRRATLAGTR TKKGAMIGFH ARKSGTIVPT RDCFLLEPAL LETLPALERI VKLGASRSAT
LGLALTLTDT GIDLHVTGAK PLDGPLRAAL PQVRGSFSRL TWGDEPVYTE TPPRLTLGTA
RVTPPPGAFL QATQDGEAAL QAAVAEATQG ATHIADLFCG IGTFTLPLAQ AAPVHAVEAA
PDLLDALDHA TRFATGLKPI TTEARDLYRR PLLPDELAKF DAIVIDPPRA GAEAQTEQIA
KAHVPVIAAV SCNPVTFARD AAILTKAGYA LDWVQPVDQF RWSPHVELAA RFTLAHISD
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