Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2931 |
Symbol | |
ID | 8385240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 3018038 |
End bp | 3020230 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644974009 |
Product | nucleic acid binding OB-fold tRNA/helicase-type |
Protein accession | YP_003131825 |
Protein GI | 257053992 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1107] Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.522801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTCGT GTATCATCTG CGGTACGTCT GTCGAAGGGC ACATCTGTGA CATCCACGAA GAAGACGCAG TCTTCGAGTT TCGCGGGAGT ACACCCGACG AACTGACGCC GGGTCGATAC TACCGCGGTA CGGTCGACGG CTTCGCCGAG TTCGGCGTCT TCGTCGACAT CGGCGATAGC GTCACTGGAC TGTTACACGA GAGCGAACTG GATAGTCGAC TTGAAAGTCT CAGCTGGCAA CCCGGCGATA CCGTCTACGT GCGCGTCACG AACGTGCGCG ACAACGGTAA CGTCGACCTC AGCTGGTCGA TCCGGCAGGC CGACGACGAG TTCCGTGGCG TCTTGATCGA CGACCCGGAC GAGGATCACG AGTTGTTGCC CGAAGAGACC GACGAGCCGA TAGACGAACA GTCGACGCCC GACGAGAGTC CTGAATCAAC CGAGTCCGAA TCGACGGACT CGAAACAAAC TGACGCGACG ACAACAGGCG CTGTGCGGAC GCGAGAAGAC TCACAGACCG GCGGCGGAGC CGTCGGCCTC GAAGAGTCTG AGTCGGCATC AGCTGCGGAC GAATCGGCCT CGGCTGGGTC AGCGGACGTC GAAGGAACTG CCGACGAAGA CGTCGAAGAT GAGCCAGCAG AAGCCGAACG GACGCCCGAA CCGCCGAGCG TCGACGTCGG CGACCTCGAG GGGTGGATCG GCGACACCGT CCGGATCACC GGCGAGATCG TCGACGCCCG CCAGACGAGT GGGCCGACGG TGTTCGAACT CCGGGACGGC ACCGGCAGCG TCGACTGTGC GGCCTTCGTC GAGGCCGGCG TCCGCGCGTA TCCGAGTGTC GAGGAAGGTG CCGTCGTCGA GATCGACGGC GAAGTCCGCG AACGTCGCGG CGAGCTCCAG GTCGAGACCG AGGAACTGGA ACTGTTCGAC GAGGACAAAC GCGAGGCAGT CCTCGAAGAG ATCGAGGCGA CGCTCAGCGA GCGCGCCCGG CCCGACGAGA TCGACCCGCT CGTCGCCGAC GAGGCGGTCG CCGCCGAGAG CGAATCGATC CGGGACGTCG TCGGCGAGAT CCGGCGGGCC GTCCTTGAGG ATCGCCCGGT GATCGTCCGC CACAGCGCCA CGACTGACGG ATACGTCGGG GGCGCGGCGA TCGAGCGCGC CGTCCTGCCG CTGGTTCGCG ATCGCCACGA CCGTCGTGAC GCGGAGTACC ACTACATCGA TCGACGGCCC ATTGAGGGCG ACGTCTATGG CCTCGACGAC GCGACCACCG ACGTGACGCG GATGCTCGGA GACCGCGAGC GTCACGACGA GAATCTGCCG CTACTGGTGT TCGTCGCCGC CGGTGGCACC GAAGAGTCGC TCGACGGATT CGAACTGCTT GATGTCTACG ACGCGTCGAA AGTGGTCATC GACACCGTCG CCGAATCGAC CATCGTGGAC ACGGTCGACG CGGCACTCGC TCCGAAGGCC GACGCGACCT CGGTCGCCAT CGCCGACGGA ACGACCCGCG GGCCGACCGC GAGCGCGCTT GCGGCGACGG TCGGTGCCCA CGTCGAGGAA GACGTCCGAC CCGATCTGGC GCACCTGCCG GCTGTGAGTT ACTGGGGCGA GGTCCCCGAG GCCTACGCCG CGGCCGCCGC CGAGGCGGGC TACGATGGGA CGGCCGTCAG CGAGATCCGC GAGGCAGTTG CGCTTGAAGC CTATTACCAG TCCTACGAGG ACAAGCGCGA ACTCGTCACG GACCTGCTCT TTGGCGGCCG CGAGACGACC GACGCCGACG TGCGCGGGCT GGCGAGTCAC GTCAGCGAGC AGTTCCGCGA AAAGCTCGAC GTCGCCGTCG AGACCGCCCA GGAGAACCTC GACCGACGCA GTGTCGGCGA CGAAACGATC GGTGTGCTTG ACATCGATCG CTTCACCCAC ACGTATGACT TCCCGCCGGC GACGCTGCTG CTCGACGAAC TCTACCGCCG GAGTGACGAT CTGACAGCGA TCGTCGGCGT CGACGAGGAC GAACTCCACG TCCGGAGCGG CCACGAACTC GACGTGCGCG AACTCGTCGA CGCGGCCGAC GAGACTGTCG AGGGGGCCGA CCTCGAACCG CTCAGCACCC GCTCGCATCG CATCGAGTTC CTCGCCGGCC AGCGCTCGAC GGTCGTCGAC GCCGTGCTCG ACGCGATCGT CGACAGCGTC TGA
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Protein sequence | MGSCIICGTS VEGHICDIHE EDAVFEFRGS TPDELTPGRY YRGTVDGFAE FGVFVDIGDS VTGLLHESEL DSRLESLSWQ PGDTVYVRVT NVRDNGNVDL SWSIRQADDE FRGVLIDDPD EDHELLPEET DEPIDEQSTP DESPESTESE STDSKQTDAT TTGAVRTRED SQTGGGAVGL EESESASAAD ESASAGSADV EGTADEDVED EPAEAERTPE PPSVDVGDLE GWIGDTVRIT GEIVDARQTS GPTVFELRDG TGSVDCAAFV EAGVRAYPSV EEGAVVEIDG EVRERRGELQ VETEELELFD EDKREAVLEE IEATLSERAR PDEIDPLVAD EAVAAESESI RDVVGEIRRA VLEDRPVIVR HSATTDGYVG GAAIERAVLP LVRDRHDRRD AEYHYIDRRP IEGDVYGLDD ATTDVTRMLG DRERHDENLP LLVFVAAGGT EESLDGFELL DVYDASKVVI DTVAESTIVD TVDAALAPKA DATSVAIADG TTRGPTASAL AATVGAHVEE DVRPDLAHLP AVSYWGEVPE AYAAAAAEAG YDGTAVSEIR EAVALEAYYQ SYEDKRELVT DLLFGGRETT DADVRGLASH VSEQFREKLD VAVETAQENL DRRSVGDETI GVLDIDRFTH TYDFPPATLL LDELYRRSDD LTAIVGVDED ELHVRSGHEL DVRELVDAAD ETVEGADLEP LSTRSHRIEF LAGQRSTVVD AVLDAIVDSV
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