| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2233 |
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| Symbol | |
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| ID | 8384527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 2279629 |
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| End bp | 2281836 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644973302 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003131133 |
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| Protein GI | 257053300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.039331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACG AGTTTTCACT CAGTCCAACC CGTCGGCAGT TGCTCGCATC GCTTGGGACT
GGCGGCGTGC TTGCTGGTGG GGTTGCGGGT TTCAGGACGA TGGCGGATGT CGTCACCCCA
ATAGCAGCCC AATCGCCCCA GCGCGGGACA CTCGTGGGGA CGATGACCGG CCCTACCCAG
GGACTGCACT TCAACCTCTT TGGAACGTCG AGCGCGGATA TCCCCGCTGC GATGGTGTTT
GACCCGACGG TGAAATACCA TCGTGGTCGC GGCGAATTCA TCCCGGCCGC CGTGACGGAG
TGGACAGTCG AGGGCGAAAC CATGACCCTC TCGCTGCGAC CGGATCTTGT CTGGGACGAC
GGCGATCCGG TGACGGCCCG CGATCTGCGA ACCCAGCTAC TGCTCGGCAA GACCGTCGAC
GACGATCTTT GGGAATACGC CACGGCAGTC GAGACGCTCG GGGAAAAGCG ACTCGCGGTT
CACTTCGACG CGTCGTACAA TCCGGACTTG CTCGAACGCA TCGTTCTCGG AGACCGCCGA
CTGTTCGTCA AACATGAGTA TTACGAGCCG TTTCTGGAGA CGTTACGTGC CGACGGCGAA
ATCGCCGCCA GAGAGGAACT CATGGCATTC ACGCCTACGT CGATGGGCGA ATTCGCCGCA
AGCGGCCCCT TCACTGTCGA CTCGATCGAC ACCGAGGGAA TCAAACTCGA ACTGAATCCG
ACCCATCCCG ACAGCGATTC CATCGGGTTC CAGTCCTACG AGTTTCGCGC CTTGCTCGGA
ACAGACACGG GGTTTCAGGC ACTCGAAACC GGCCAGGTCG ACGTGATCGC CTCGATGTCG
ACGCTACCGA ACCAGCCCAT CGAATTGCCA TCATCCGTTG TACAGGTGCG GATCCCCGAT
TATTGGGGGT TGGGCCTCTG GCCGAACCAC GATGTCGAGC CGCTGGACGA CCGGGCCGTC
CGACAGGCAA TCGCCTTTGT CATCGACCGC TCGGCCGTGA CCCAGGCGAG TGGCCGGGAA
ACGAACCAGC CGGTAGAGAC GCCAAGTGGC CTGCCGGCGT CCGCTGTTGC GGACTGGATA
GCGCAGGATT CACTGGAGAC GTATGTCGAT CCGGATAACG AGGCTGCGAC AGACGTCCTG
TCGAGGGCAG GATATACTCG CGAGGATGGA ACCTGGACGG CGGAGGACGG GACCCCCCTC
GGCTTTTCGA TATCGGTCCC CGAGTTCATC ACCGACTTCG TCAACGCGAC GGATTCCGTC
GCCGAACAAC TCCGTTCGTT CGGCATCGAA GCCGACGTTC GGGAAGTGAC GTTTCGGGAC
ATCTTCGCCG GTGACTTCGA CGTCGTGTCG GGGTGGTGGC TACCGGGGAG CATCGACAGT
ACACACCCGT ACGTCGCGTA CAGGTTCGGG TTCGGCATGG GGATGGTCCA GCCCGATCTA
CTCGAGTATC CAGGGTTGGA CAGCACCGTG ACTGTGCCCG CGGACGGGAA CAACGGCTCG
ATAGACGTCA CTCCCCAAGA CGAACTGGAA GCGCTGGCCA CGACTGTCGA CCGCGGCGAG
GCCGAATCGA TCGTGCAGCG ACTCGCAAAG GTGTACAACG CGGACCTTCC GATGCTCCCA
CTCTACCGGA GTCAATATAC GTCGTTCATC GATACGAGCG CCGTCGACGC ACCGGCGGAA
GGTTCACCGA AGTTCCAGAT CACGTGGCCC CCGCACTGGC TTGTTCGAAC CGGCGATCTG
CACAGTCCAG GCTGGGCCGA GAACGAAGCC TCGACACCCA CCGAGACAGT GACAAATACG
CCGACTGCGA CGGACACGGA ACGGGAGACG CCATCGGCAA CCGAAACCGA GACGACACAA
CCGACGGAGA CGGCGACAGA ATCCAGCCCG TCGACACCGA GCGAGACGGC GACGAAAACG
GTGACGCCGA CAGCAACCCC GACAGACCCA AAAACAGCGA CAGTCAGCGA GACAGTCACG
AACACTCCGG CAACGACCGA GACAGACCGA TCGGCCACTG AATCACGGAC GACGACGGTC
ACGGAGATAC CGACCTCGAC GACCGATGCT GAATCAGAAG GTGGCCAGAA CACCCAGGAC
AGCACCGACG GAGCCACCAC GACCAACGGT CCGGGGTTCG GTCTCCTCTC GTCGGTGGCT
GGATTAGGTA GCTACGCGCT CTATCGGGCC AGGAAACGGG ACGGGTAG
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| Protein sequence | MSDEFSLSPT RRQLLASLGT GGVLAGGVAG FRTMADVVTP IAAQSPQRGT LVGTMTGPTQ
GLHFNLFGTS SADIPAAMVF DPTVKYHRGR GEFIPAAVTE WTVEGETMTL SLRPDLVWDD
GDPVTARDLR TQLLLGKTVD DDLWEYATAV ETLGEKRLAV HFDASYNPDL LERIVLGDRR
LFVKHEYYEP FLETLRADGE IAAREELMAF TPTSMGEFAA SGPFTVDSID TEGIKLELNP
THPDSDSIGF QSYEFRALLG TDTGFQALET GQVDVIASMS TLPNQPIELP SSVVQVRIPD
YWGLGLWPNH DVEPLDDRAV RQAIAFVIDR SAVTQASGRE TNQPVETPSG LPASAVADWI
AQDSLETYVD PDNEAATDVL SRAGYTREDG TWTAEDGTPL GFSISVPEFI TDFVNATDSV
AEQLRSFGIE ADVREVTFRD IFAGDFDVVS GWWLPGSIDS THPYVAYRFG FGMGMVQPDL
LEYPGLDSTV TVPADGNNGS IDVTPQDELE ALATTVDRGE AESIVQRLAK VYNADLPMLP
LYRSQYTSFI DTSAVDAPAE GSPKFQITWP PHWLVRTGDL HSPGWAENEA STPTETVTNT
PTATDTERET PSATETETTQ PTETATESSP STPSETATKT VTPTATPTDP KTATVSETVT
NTPATTETDR SATESRTTTV TEIPTSTTDA ESEGGQNTQD STDGATTTNG PGFGLLSSVA
GLGSYALYRA RKRDG
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