Gene Huta_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1870 
Symbol 
ID8384161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1873355 
End bp1874395 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID644972939 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_003130773 
Protein GI257052940 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.181656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACG CAGGCACATC GATCGACGTC CTGTTGATCG AGGACAATCC CGGCGACGCC 
CGCCTCGTCG AGCACCATCT CAACGAATCC CACGTGGCCG ACATCGTCGG CGACGTCACC
CTCGAACACG AGGAGACGCT CGCCGAGGGG CTCCGGGCGA TCGAAGCCGG CCGACACGAC
ATTCTGTTTC TCGATCTAGG GTTGCCCGAG AGTACCGGGC TGGCGACGCT TGGGGCCGTC
CAGGACGAGG ACCCCCGCGT TCCGATCGTC GTGCTCACCG GCCTGGACGA TCGGGAGACC
GCCGTCACGG CGATCCAACG CGGGGCCCAG GACTACCTGC TGAAGGACGA CCTCGACGCG
GACGATCTCG CCCGGTCGCT GCGCTACGCG GTCGAGCGAC ACCGGCAGGA AGCCCAGCTT
CGCCTCCAGA ACGAGCGTTT AGAGGAGTTC ACCAGCGTCG TCTCCCACGA CCTGCGAAAC
CCGCTCAACG TCGCCCACGC CCGGGTGAAC ATCCTGCGGG ACGAGGCCGA CAACGACCAC
CTCGAGACCG CCTCGCGGGC GCTCGATCGG ATGGAGGCCC TAATCGAGGA CCTCCTGACG
CTGGCCCAGC AGGGCCGGGC CATCGACGAC CTGTCGACCG TCCGCCTCGA CGTCGTCGCC
GAGGACTGCA GGGAGAACGT CGACACGTCG GACGCGGACG TGATCGTCGA CACTGACGCG
ACCGTCCGTG CCGACGGGAG TCGCCTGCAG GAACTCCTCG GCAACCTCCT CAGAAACTCG
ATCGAGCACG GCGGGGCAGC CGTGACGATC ACGCTCGGCG ACCTCGCCGA CGGGTTCTAC
GTGGCGGACG ACGGCCCCGG CATCTCCGCT GACGACCGCG AGCAGGTGTT CGAGATGGGG
TACTCGACCT CCGAGGGTGG GACGGGGTTC GGTCTCATGA TCGTCGAGGG GATCGCCGAA
GCCCACGGCT GGGACGTCCG CGTGACCGAA AGCGAGGCCG GCGGGGCGCG GTTCGAGATC
ACCAGCGTCG ACGTGCACTG A
 
Protein sequence
MSDAGTSIDV LLIEDNPGDA RLVEHHLNES HVADIVGDVT LEHEETLAEG LRAIEAGRHD 
ILFLDLGLPE STGLATLGAV QDEDPRVPIV VLTGLDDRET AVTAIQRGAQ DYLLKDDLDA
DDLARSLRYA VERHRQEAQL RLQNERLEEF TSVVSHDLRN PLNVAHARVN ILRDEADNDH
LETASRALDR MEALIEDLLT LAQQGRAIDD LSTVRLDVVA EDCRENVDTS DADVIVDTDA
TVRADGSRLQ ELLGNLLRNS IEHGGAAVTI TLGDLADGFY VADDGPGISA DDREQVFEMG
YSTSEGGTGF GLMIVEGIAE AHGWDVRVTE SEAGGARFEI TSVDVH