| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1644 |
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| Symbol | |
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| ID | 8383924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1626047 |
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| End bp | 1628509 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644972706 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003130551 |
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| Protein GI | 257052718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGACGG CAGGACTCGT CGCGGTCGTA CTACTTGGGT TATGTGCAGG CGGGGCACTG
GTCGACGGGG CAGTGGCGAG CGATACTAGT ACCACGACAG ATGGAACGTT TGACCAGGGT
ATCGCTCTCA ACGAAACGAT CGAGAGCGAA CTCGACGCCG GTGACCGATT TGATGAAGAG
ATGGCGGGTC ATCACGAGAA CTACACCTTC TATGCGGAGA GTGGTGACGT GATTTCAGCG
GAGATGCGTC CTGACGGAAG CAATGGTCAC GCTACCGATG CACACGCCGC ACAGTTGAGG
CTATACGCAC CGAACGGTAC CGAGGTCTTC GGAAGCTATA ATGACGTACA AGGATCAGCA
CAGCTAGAAT CCGTTTCACT CGATGCTACC GGGCAGTACA CCTTGATTGC GACGACGAAC
GATATCGGTG CGGTTGGTTC CTATTCTGAC GATGTCTACG ATGACGAGAC TGCTGCTCGG
ACGGATACGT TCGAGTATCA ACTTCGACTG TATGAGGGAC TGGGCCCCGA TCGAGCGTTA
AATATCGGTG AAAATATCAC AGACTCAGTC TCGGAAGCCG ATAATTATCT CGACGATCAA
GCGGGCTATT ACGACGCATA TACGTTTGAG GGACAAACTG GACAAACCAT CTCAGCAGAA
CTGCGGCCCA ACGGGAGTAG TGGTCACGCT ACCGCTGCAC ACGCCGCACA GTTGAGGCTA
TACGCACCGA ACGGTACCGA GGTCTTCGGA AGCTATAATG ACGTACAAGG ATCAGCACAG
CTAGAATCCG TTTCACTCGA TGCTACCGGG CAGTACACCT TGATTGCGAC GACGAACGAT
ATCGGTGCGG TTGGTTCCTA TTCTGACGAT GTCTACGATG ACGAGACTGC TGCTCGGACG
GATACGTTCG AGTATCAACT TCGACTGTAT GAGGGACTGG GCCCCGATCG AGCGTTAAAT
ATCGGTGAAA ATATCACAGA CTCAGTCTCG GAAGCCGATA ATTATCTCGA CGATCAAGCG
GGCTATTACG ACGCATATAC GTTTGAGGGA GAGCGGGGAA AGACCCTGAA TTTCGAGATG
CGGGTCAATC AGCCGACTAC AAAGGCCGCA CAGTTGAGGC TATACGCACC GAACGGTACC
GAGGTCTTCG GAAGCTATAA TGACGTACAA GGATCAGCAC AGCTAGAATC CGTTTCACTC
GATGCTACCG GGCAGTACAC CTTGATTGCG ACGACGAACG ATATCGGTGC GGTTGGTTCC
TATTCTGACG ATGTCTACGA TGACGAGACT GCTGCTCGGA CGGATACGTT CCGCTATCAA
CTCCGGGCCT ACGAGCTCGG TGCCGACGCG CCGGTTCTGA CAACCGGCAC GTCGCTTACG
GGTGCGCTCT CAGTACGTGA TAATTACCTT GATAAGACCG ACGGCTTCTT CGATCTCTAT
CACGTGTCAG CGACTTCCAG CTCGGAACTC ACCGCAACAG TGATAGTCGA TAATCCAACT
GATCATGCAG CACGAGTCGC AGTCTATGAT AATGACGGGT CGATAGTCGA CAGGAGTTAT
AATAACGATG GAGGTGGCGT GACGCTGGAT TTCTCGCCCG ATACGACCGG CGGTTACTAC
CTTGCAGTGA CCACGGAACC CGATGCATCA ACGTACGGAT CGACTCGGAA GGGATTACGG
GATACGTTCA GGTATCAGCT TACCATCGAT GGGCCCGAAA ACAGTCCACC GATTGTAACG
GCCAAAGCAC CACATCTTGT CGCTAACGAG CAGACGGTTA GACTTAACGC CACTGCGCTC
GATCCGAATG GTGACGCGCT CTCCTACCAG TGGAGCCAGG TGATGGGGGC GTTCCCGGAT
CCTGAAGTCA CAATCGAAAA TGCTGATGAA GCTGTTGCGA TGTTCACCGC GCCAGATGTC
CCGGCTGCGA CTGAGTTGAC GTTCGACGTG GCAGTTACCG ACGATAGTGG TGCCACTACA
CACGATACGG TCAACGTGAC TGTTGACCCA AATTATAGTC CACCGTCGGT TGACTTCACA
TATACCCCAT CGAATCCCAC AGCAGATGAA ACAGTGTCGT TCAGTGAGAG CGCTTCCGAT
CCGGATGGAT CGATCCAGTC TTACGACTGG CAATTCGGTG ACGGCAACAG TTCCAGTAGT
ACCAATCCAA CACATACCTA CAGCAGTGCT GGAAGTTACA ATGTGTCGCT GACTGTCGCC
GACGGCGACG GCAATACGAA CTCGACGACC AAACCACTTA GCGTCGAAGC GGACCAGTCT
TTCTTGACGA TTGAGCAAGC GATCGACAAG AATAGTGACG GCCAGATAGG CGACTTTGAA
GTCCTCACCG CGGTCGAATA TTGGCGCGCT GGCGAAACTG TGCCAAACAC GAATGGAAAG
AAGATCAGTG ACAGCAAGAT CGCTGCTCTT CTCGAACACT GGCGCACGGG GACAGAGGTG
TGA
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| Protein sequence | MRTAGLVAVV LLGLCAGGAL VDGAVASDTS TTTDGTFDQG IALNETIESE LDAGDRFDEE
MAGHHENYTF YAESGDVISA EMRPDGSNGH ATDAHAAQLR LYAPNGTEVF GSYNDVQGSA
QLESVSLDAT GQYTLIATTN DIGAVGSYSD DVYDDETAAR TDTFEYQLRL YEGLGPDRAL
NIGENITDSV SEADNYLDDQ AGYYDAYTFE GQTGQTISAE LRPNGSSGHA TAAHAAQLRL
YAPNGTEVFG SYNDVQGSAQ LESVSLDATG QYTLIATTND IGAVGSYSDD VYDDETAART
DTFEYQLRLY EGLGPDRALN IGENITDSVS EADNYLDDQA GYYDAYTFEG ERGKTLNFEM
RVNQPTTKAA QLRLYAPNGT EVFGSYNDVQ GSAQLESVSL DATGQYTLIA TTNDIGAVGS
YSDDVYDDET AARTDTFRYQ LRAYELGADA PVLTTGTSLT GALSVRDNYL DKTDGFFDLY
HVSATSSSEL TATVIVDNPT DHAARVAVYD NDGSIVDRSY NNDGGGVTLD FSPDTTGGYY
LAVTTEPDAS TYGSTRKGLR DTFRYQLTID GPENSPPIVT AKAPHLVANE QTVRLNATAL
DPNGDALSYQ WSQVMGAFPD PEVTIENADE AVAMFTAPDV PAATELTFDV AVTDDSGATT
HDTVNVTVDP NYSPPSVDFT YTPSNPTADE TVSFSESASD PDGSIQSYDW QFGDGNSSSS
TNPTHTYSSA GSYNVSLTVA DGDGNTNSTT KPLSVEADQS FLTIEQAIDK NSDGQIGDFE
VLTAVEYWRA GETVPNTNGK KISDSKIAAL LEHWRTGTEV
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