Gene Huta_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1618 
Symbol 
ID8383897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1598457 
End bp1598882 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content63% 
IMG OID644972679 
Productprotein of unknown function DUF296 
Protein accessionYP_003130525 
Protein GI257052692 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTATC GGGAACTCAC CGGGTCGCGG GAGTTCGTCG CCAGCCTGAC CCACGGCGAG 
GACTGGCGCG GCCAGATCGA GGCTTTCGCC CGGGATGAGG GGATCAAGGC GGCCGTCTTC
TTCGGCCTCG GGACCGTTCA GGACGCGGCG ATCTGGTACT ACGATCAGGA CGAACAGACG
TATCGCGAGA CGGTCTTCGA CGAACCGCTT GAAGTCGCGG CCTGCGTCGG GAATATATCG
CTCGATGTCG ACGGAGAGCC CTTCGCACAC ACACACGTCG TCCTCTCCCG CGAGGACGGA
TCGACGATCG CTGGCCATCT CGATGCAGGG ACAACATACA TCGGCGAACT GTACGTTCGG
ACGTTCGAGG AATCGCTCGA ACGCGCTCCG GACGAGACGA CCGGTGGCGA CCTCTGGGCG
CTGTAA
 
Protein sequence
MHYRELTGSR EFVASLTHGE DWRGQIEAFA RDEGIKAAVF FGLGTVQDAA IWYYDQDEQT 
YRETVFDEPL EVAACVGNIS LDVDGEPFAH THVVLSREDG STIAGHLDAG TTYIGELYVR
TFEESLERAP DETTGGDLWA L