| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1426 |
|---|
| Symbol | |
|---|
| ID | 8383705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1395360 |
|---|
| End bp | 1396202 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644972489 |
|---|
| Product | Polyprenyl synthetase |
|---|
| Protein accession | YP_003130335 |
|---|
| Protein GI | 257052502 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTACC TGGAGCGACG GCGGGACCTC ATCGAAACCC GACTCGAAGA CGTCCTGGCG
TCGGTCGACC CGGCCGAACT GTCGAGCGAA CTCGAAAACG TCGTCCTGGC GGGCGGCAAG
CGGGTTCGAC CGACCGTGTC GTTGCTGGTC TGTGAAGCCG TCGGCGCGGA ACCGGAGGAC
GCCGTCGACT TCGCGGTCGG CGTCGAACTC GTCCACAACG CGTCGCTGGT CGTCGACGAC
ATCATCGACG AGTCCGACCG CCGGCGTGAC TCACCCAGTG CCTGGTCGGC CTTTGGCCAC
GGGCCGGCAC TCATCGCCAG TGACGGCCTG ATCGGCGAGG CGTTCGCCCT GTTCTCGACC
GACGAGCGTG CGATGCGAGC CGTTTCCGAG GCGATGGTCG AACTCGGCGA GGGCGAAGCC
ACCGAACTCG CCGCGATGCC CGACTCCGAG GACGCCTACC GACAACTCGC CCGACGAAAG
ACCGGCGCGC TGTTTCGGGC CGCGGCCGAA CTCGGCGCGA TTGCGGCCGA CGCCGACGCA
CGCACGGTCG AGGCGTTCGG GCAGTACGCC GAACAGGTCG GCATTGCCTT CCAGATCCGT
GACGACGTCC TCGACGCGAC GGGTGACGCC GAACAACTCG GGAAGCCCGC CGGCCACGAC
GCCGAAATGG ACCGTCCATC GATCGTCCAG GTCACCGATC TTTCGCCGGC GGAGGCCACC
GAACGTGCTC GCAGTGAGGC CGACGCCGCC CTCGACCAAC TGGAGACCGT CCCGGTCGAA
AACGAACAGG CGGTCGAGTA TCTCCGTGAC CTGGCGAACT TCGTCGTCGA ACGCGAGCGG
TGA
|
|---|
| Protein sequence | MEYLERRRDL IETRLEDVLA SVDPAELSSE LENVVLAGGK RVRPTVSLLV CEAVGAEPED
AVDFAVGVEL VHNASLVVDD IIDESDRRRD SPSAWSAFGH GPALIASDGL IGEAFALFST
DERAMRAVSE AMVELGEGEA TELAAMPDSE DAYRQLARRK TGALFRAAAE LGAIAADADA
RTVEAFGQYA EQVGIAFQIR DDVLDATGDA EQLGKPAGHD AEMDRPSIVQ VTDLSPAEAT
ERARSEADAA LDQLETVPVE NEQAVEYLRD LANFVVERER
|
|---|
| |